Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02082 ATGGCGGTGGCAATAGGGAGAGGCTTCCCATTTCAGCCATGCTCCGTATTCAAGAGTAAGAGCATAGGTAAAGCTTCACTAGGTCTATGTGGGACAGAGTCGTGGCCCCAACCTGCTGGTGCAGAAACTACCAGGAGATGTTCCCGAACTCGCGTGGCAGCCCAACAAGAACAACGGCCAACATGGCTCCCAGGGCTTGATCCCCCACCTTATCTTGATGGAACTCTGGCTGGGGATTTTGGGTTCGACCCACTTGGACTCGGAGAGGATCCCGAAAGCTTAAGGTGGTACGTGCAAGCAGAGCTGGTTCATGCTCGCTTTGCAATGATTGGAGTTGCTGGAATTCTATTCACAGATCTACTTCGCATCACAGGACTTAGTAAGGTACCAGTTTGGTTTGAAGCCGGCGcagtaaaatatgaatttgcCAATACAGAGACTCTGTTCCTCGTCCAGCTACTTTTGATGGGATTTGTTGAAACAAAAAGGTACATGGATTTTGTTAGTCCTGGTTCTCAAGCTAAAGAGGGATCCTTCTTCGGATTGGAAGCTTCATTTGCAGGTTTAGAACCAGGATACCCTGGAGGTCCTCTGCTGAATCCTCTTGGTTTGGCTAAAGATATAAAGAGCGCTCATGACTGGAAGCtcaaagagattaaaaacGGACGACTTGCAATGGTGGCGATGCTTGGCATCTTTGTTCAAGCTTCAGTCACTCATGTTGGACCAATTGATAACCTCGTGGAACATCTCTCCAATCCATGGCACAGAACTATTATTCAGACGCTTTCCTCCTCTAGCTCTTA 806 0.4665 MAVAIGRGFPFQPCSVFKSKSIGKASLGLCGTESWPQPAGAETTRRCSRTRVAAQQEQRPTWLPGLDPPPYLDGTLAGDFGFDPLGLGEDPESLRWYVQAELVHARFAMIGVAGILFTDLLRITGLSKVPVWFEAGAVKYEFANTETLFLVQLLLMGFVETKRYMDFVSPGSQAKEGSFFGLEASFAGLEPGYPGGPLLNPLGLAKDIKSAHDWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNLVEHLSNPWHRTIIQTLSSSSS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02082 268 Pfam Chlorophyll A-B binding protein 68 236 IPR022796 -
Bva06g02082 268 SUPERFAMILY Chlorophyll a-b binding protein 56 264 - -
Bva06g02082 268 PANTHER PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 5, CHLOROPLASTIC 1 265 - -
Bva06g02082 268 Gene3D Chlorophyll a/b binding protein domain 69 256 - -
Bva06g02082 268 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 265 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02082 Bva-Chr6 13834340 13835884 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02082 44 264 Chloroplast and Mitochondria Gene Families AT3G61470 44.595 9.23e-62 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02082 K08911 - gmx:100804934 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02082 06 13834340 13835884 Bva06g02082 06 13834340 13835884 ECH