Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02074 ATGGTGGTGGCTAAAGTGTCATACGAGGAGAGACGCCGCCAAAGATTGGAGGAAAACAGGAGGAGGATGGAAGAGCTTAATCTGCCTCAGCTGTCTCAAGCCCTCCGAAACTTCCCTTCTCCCAAACCGTCCCCGATGAAACGGGTGAAACCTCGCTCCATCCAGAAGCAGGTAGTTGTCGTAAGGAGGTCTAGCCGTGTCGCAAACATGCCGGCTCCCGTTTTCAAAGAGGTGGTTATTGATCGAGTGGCAATCCCTAGGAGAATTTATAGGCAAAGGGATTTATCCAACCGGGTATATGCTACAGAGGAAGCCAGGCAAGAAGCACTCGAGAAAGCAGAACAGTTACAGTTGAGTTTGGAATCTGAGTTCCCGACCTTTATAAAGTCAATGTTGCAGTCACATGTAAGCGGGGGATTTTGGCTGGGCCTTCCAGTCCACTTCAGTAAGAAAAACCTTCCCAAGAAGGACGAAGTAATTACGTTGATAGACGAGGATGTCAACGAGTACCCTACAATCTATTTACCCCGGAAAACAGGGCTAAGTGGTGGGTGGAAAGGTTTTGCCGTTGCTCATAACTTAGCTGATGGAGACGCATTAGtttttcagttaattaggcgTACAGCATTCAAGgtTTATATAATTAGGGTGAATAGTCCTGCCGAAGACAAACAactcta 680 0.4588 MVVAKVSYEERRRQRLEENRRRMEELNLPQLSQALRNFPSPKPSPMKRVKPRSIQKQVVVVRRSSRVANMPAPVFKEVVIDRVAIPRRIYRQRDLSNRVYATEEARQEALEKAEQLQLSLESEFPTFIKSMLQSHVSGGFWLGLPVHFSKKNLPKKDEVITLIDEDVNEYPTIYLPRKTGLSGGWKGFAVAHNLADGDALVFQLIRRTAFKVYIIRVNSPAEDKQL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02074 226 Gene3D - 101 219 IPR015300 -
Bva06g02074 226 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 1 219 IPR044837 -
Bva06g02074 226 SUPERFAMILY DNA-binding pseudobarrel domain 120 218 IPR015300 -
Bva06g02074 226 CDD B3_DNA 125 216 IPR003340 GO:0003677
Bva06g02074 226 ProSiteProfiles B3 DNA-binding domain profile. 127 218 IPR003340 GO:0003677
Bva06g02074 226 PANTHER B3 DOMAIN-CONTAINING PROTEIN 1 219 - -
Bva06g02074 226 Coils Coil 6 26 - -
Bva06g02074 226 SMART B3_2 127 218 IPR003340 GO:0003677
Bva06g02074 226 Pfam B3 DNA binding domain 127 216 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02074 Bva-Chr6 13793378 13794857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02074 1 223 B3 DNA Binding Superfamily AT3G19184 53.478 8.32e-71 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bva06g02074 B3 7e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02074 - - gmx:100797091 313.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02074 06 13793378 13794857 Bva13g00286 13 1346964 1349799 ECH
Bva06g02074 06 13793378 13794857 Bva14g00360 14 1789225 1791077 ECH
Bva06g02074 06 13793378 13794857 Bva06g02074 06 13793378 13794857 ECH