Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02048 ATGAAGtttcatatcaaaatcaaaatgcagGCCTCGGGCTGCTTgttaatattatctttattagCCTTATCATCCTTCTCATCCGCTCTATCCAATACTCAAGCTTCTTTCATTGCTCGTCACCAGTTATTACACATCCACGAGGGTGGAGATTTACCAGAAAACTACGTTGATACGTATAAAACAGATCTAACATTCCCCAATCCCAGACTCAAAAGTGCGTACATTGCACTTCAAGCTTGGAAACATGCAATCTATTCCGACCCAATGAATACCATGGCCAATTGGGATGGTCCCGATGTTTGTTCTTATAATGGAGTCTTTTGTGCACCAGCTTTAGATGACCCTAAAATTAACGTTGTGGCTGGAATTGATCTTAACCATGCAGACATTGCAGGCTACATTCCTCCTGAGATTGGTTTGTTGACAGACCTTGCTCTTTTTCACATTAACTCAAACAGGTTTTGTGGCATTCTTCCACCGAGCTTTTCCAAGCTAAGAATTCTATATGAGCTTGATATCAGCAACAATCGCTTTGTTGGTAAATTCCCCGAGCATATTCTATCCATTCCTGAACTCAGATACCTTGATTTGAGGTACAACGACTTTGAGGGCGAATTGCCTCATGAGCTTTTCAACACCAAACTTGATGCTATCATACTAAACAACAACCGCTTTACATCTACAATTCCAGAGAATCTTGGGAATTCTCAAGCTTCAGTGGTGATGTTAGCCAATAATCATTTCAATGGTTGCATTCCAGGGAGCATCGGCCAAATGGAAAAGACATTGCATGAGTTTGTTGTGATCAATAACAATCTTACTGGGTGCTTGCCTGCAGATGTTGGAAAGCTTAGTAGCGTGATACTGTTCGACATTAGCGAGAATTTCTTTGGTGGCATCTTACCTAAGAGCTTGGATGGGCTGAAAAATGTGCAGGAAATGTCAATTGCACACAATAAACTAACCGGGTTTGTTCCACAGGGAATCTGTCGATTGCCGAGCTTAGTGAATTTCACATTTtctgataattattttaatggtgAGGAAGATGGTTGTTCGTCTTCTTCCCGAAAAGACATTGTGATGGATGATTCAAACAACTGCTTACCAAGTAGGCCCAAGCAGAAGGTCGCAAACACTTGCAATGTGGTGATTAGCAAGCCTGTTGATTGCAGCAAGGCACAATGTGGCAATCCGTCAAAAACTAGCTTCAATCCACCAACTCCAAAATCACAACCACCACAACAGCGGACTCCTAAGCCGCAACCACAACCGGAAGCACCTAAACAGGCACCACAGCCACCCAAACCAGAAGCACCTAAACAGGCACCACAGCCGCCCAAACCACAAGCACCTAAACAGGCACCACAGCCGCCCAAACCAGAAGCACCTACACATGCACCTCAGCCGCCCAAACCAGAAGCACCTAAACAGGCACCACAGCCGCCTAAACCAGAAGCACCTAAACAAGCACCACAGCCACCCAAACAACAACCACCAAAAGAGGAACCAAAACCACAACCACCTGAAGAGCCAGAAAAACTACAACCACCCAAGGAGCAACCAAAACCACAGCCATCCGAAAAGCCACAACCACCCACAACGCAACCCCCAACCCCAGCAGAGACAACCCTACCACCATCAGAGAATCCTCATGATGAATCACCTGGAGGACGAAAGAGGCCCTCACGTTCATCTCCACCTCCGCCACCAGTCCATTCCCCACCACCACCGGTCCTTTCTCCTCCGCCCCCAGTCCATTCCCCACCACCACCTGTCCTTTCTCCTCCGCCACCAGTCCATTCACCACCACCACCTGTCCTTTCTCCTCCGCCACCAGTCCATTCCCCACCACCACCGGTCCTTTCTCCTCCGCCACCAGTCCATTCCCCACCACCACCTGTCCTTTCTCCTCCGCCACCAGTCCATTCCCCACCACCTCCTGTTTATTCTTCTCCACCCCCAGTCCattcaccaccaccaccaaccCAGTCTCCACCACCAGTCCACTCCCCACCTCCACCAGTTCACTCTCCTCCACCACCAATCCACTCCCCTCCACCACCAGTCCACTCCCCACCTCCACCAGTTCACTCTCCTCCACCACCAGTCCACTCTCCTCCACCACCAGTCCACTCCCCACCTCCACCTGTCCAATCTCCACCTCCACCTGTTCAATCTCCACCTCCTCCTATCTTTTCTCCACCACCACCTGTCCAATCTCCTCCCCCGCCTGTCAACTTTTCACCACCACCTTCTCCATCCCTTTCACCTCCTCCTCCTGTTGTCTCCCCACCCCCTGCAGACGAAGACATTATTCTTCCACCACACTTTGGCTCTTCATATGCGTCGCCACCCCCACCAGCCATAGTCGGCTACTA 2384 0.4799 MKFHIKIKMQASGCLLILSLLALSSFSSALSNTQASFIARHQLLHIHEGGDLPENYVDTYKTDLTFPNPRLKSAYIALQAWKHAIYSDPMNTMANWDGPDVCSYNGVFCAPALDDPKINVVAGIDLNHADIAGYIPPEIGLLTDLALFHINSNRFCGILPPSFSKLRILYELDISNNRFVGKFPEHILSIPELRYLDLRYNDFEGELPHELFNTKLDAIILNNNRFTSTIPENLGNSQASVVMLANNHFNGCIPGSIGQMEKTLHEFVVINNNLTGCLPADVGKLSSVILFDISENFFGGILPKSLDGLKNVQEMSIAHNKLTGFVPQGICRLPSLVNFTFSDNYFNGEEDGCSSSSRKDIVMDDSNNCLPSRPKQKVANTCNVVISKPVDCSKAQCGNPSKTSFNPPTPKSQPPQQRTPKPQPQPEAPKQAPQPPKPEAPKQAPQPPKPQAPKQAPQPPKPEAPTHAPQPPKPEAPKQAPQPPKPEAPKQAPQPPKQQPPKEEPKPQPPEEPEKLQPPKEQPKPQPSEKPQPPTTQPPTPAETTLPPSENPHDESPGGRKRPSRSSPPPPPVHSPPPPVLSPPPPVHSPPPPVLSPPPPVHSPPPPVLSPPPPVHSPPPPVLSPPPPVHSPPPPVLSPPPPVHSPPPPVYSSPPPVHSPPPPTQSPPPVHSPPPPVHSPPPPIHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVQSPPPPVQSPPPPIFSPPPPVQSPPPPVNFSPPPSPSLSPPPPVVSPPPADEDIILPPHFGSSYASPPPPAIVGY 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02048 794 Pfam Leucine rich repeat 146 203 IPR001611 GO:0005515
Bva06g02048 794 SUPERFAMILY L domain-like 74 370 - -
Bva06g02048 794 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 14 635 - -
Bva06g02048 794 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 625 690 - -
Bva06g02048 794 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 14 635 - -
Bva06g02048 794 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 625 690 - -
Bva06g02048 794 MobiDBLite consensus disorder prediction 504 519 - -
Bva06g02048 794 MobiDBLite consensus disorder prediction 395 794 - -
Bva06g02048 794 MobiDBLite consensus disorder prediction 563 773 - -
Bva06g02048 794 MobiDBLite consensus disorder prediction 407 503 - -
Bva06g02048 794 Gene3D Ribonuclease Inhibitor 240 383 IPR032675 -
Bva06g02048 794 Gene3D Ribonuclease Inhibitor 74 239 IPR032675 -
Bva06g02048 794 PRINTS Proline rich extensin signature 453 465 - -
Bva06g02048 794 PRINTS Proline rich extensin signature 414 426 - -
Bva06g02048 794 PRINTS Proline rich extensin signature 433 449 - -
Bva06g02048 794 PRINTS Proline rich extensin signature 465 486 - -
Bva06g02048 794 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 686 791 - -
Bva06g02048 794 MobiDBLite consensus disorder prediction 520 546 - -
Bva06g02048 794 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 686 791 - -
Bva06g02048 794 Pfam Leucine rich repeat N-terminal domain 75 109 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02048 Bva-Chr6 13667093 13669477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02048 13 544 Trihelix Transcription Factor Family AT3G19020 52.406 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02048 - - gmx:100780677 579.326