Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02047 ATGGGGGAAACATGCCCAAGTTTGAGCAGATCATGGGCAGAAGATATATACTGGACCCATTTCCggttcatccattttgctctGTATCTCCCTACTGGATATGATCAACAACTAGCACTTCCCAGAAGATTTTCAGATAGTTTGAAAAAGAAGTTGCCGAATAAAGTGACTATCAGAGGTCCTGGTGGTGCTATATGGAATATAGGTTTGACAACTAGAGATGACACCTTATTCTTCGCACATGGTTGGCAAGAATTTGTGAAAGATCACAAATTGGAAGAGAATGACTTGCTGGTCTTTAAGTACAACGGTGAATCACAGTTTGATGTTTTGATCTTTGATCGGGAGAGCTTCTGTGAGAAGGCAGCTTCTTATTTTGTTCGAGAATGTGGGTATACAGAGCATGCAAATGAAAGTTTGAATGCGAGAAAAGAGACAGGCTTCAAAGAAGTTCACACCCCTTCTAATGCTGGAACTGGATGTGCTTCACCTGAGAAATCTACTGATGGTGACTGTACAAGAGTGCCAGAAGTTGTCCCCTCTGAAACTACTAGTAAAAAGATTTGCAGTGCTGTCAATGAAAGTACCACCCCTCGGAAACCCTCAATTCGGGATGTTACCAGAGACCCAGCGGTTGTTCCTTTCCAAACTAACAGTGAAAGGATTCAGAAGCTGGTTTCTGCTGTTAAGCATGTCCAGACAAAGCGGAGAGGAAGACCCAAAGCGTCAGCTAAAGCTGAACCTTCATCTGTGGGTGGAAGTGGAAGCTTTCAAACCTATACTTCCAAAAGAAGGCCAGTCACCGAAAGTGAGAAGACCAAGGCACTTCAGCTGGCTCAGGCTGCATGTACGAATGACAGCTTCAGCATGGTGATGCGACCCACGCATGTATACAAGGGATTCTATTTGTCAATTCCTAGCAAGTGGAATGCAGAACATCTCCCTCAACAAAATCAAGATGTGATATTACGCGTTGGAAAGTCGGAATGGATTGCCAGATATAGCTACGGTCATAGTCGTGGCACGGGAGGATTTTCTCGGGGCTGGAAACACTTCGCTTTGGATAATAACCTTGAAGAATTTGATGTCTGTGTGTTTAAACCAGCAGGTAAAATGAACAACGCCTTGATCTTGGACGTTTCCATATTCAGGGCTGTTGAGGAGAATGTGAATTCTGGGGCAAAGAAGGGTGGTGTGACAATGGATATTTTGTA 1214 0.4325 MGETCPSLSRSWAEDIYWTHFRFIHFALYLPTGYDQQLALPRRFSDSLKKKLPNKVTIRGPGGAIWNIGLTTRDDTLFFAHGWQEFVKDHKLEENDLLVFKYNGESQFDVLIFDRESFCEKAASYFVRECGYTEHANESLNARKETGFKEVHTPSNAGTGCASPEKSTDGDCTRVPEVVPSETTSKKICSAVNESTTPRKPSIRDVTRDPAVVPFQTNSERIQKLVSAVKHVQTKRRGRPKASAKAEPSSVGGSGSFQTYTSKRRPVTESEKTKALQLAQAACTNDSFSMVMRPTHVYKGFYLSIPSKWNAEHLPQQNQDVILRVGKSEWIARYSYGHSRGTGGFSRGWKHFALDNNLEEFDVCVFKPAGKMNNALILDVSIFRAVEENVNSGAKKGGVTMDIL 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02047 404 Gene3D - 20 119 IPR015300 -
Bva06g02047 404 CDD B3_DNA 37 114 IPR003340 GO:0003677
Bva06g02047 404 SMART B3_2 26 116 IPR003340 GO:0003677
Bva06g02047 404 SMART B3_2 288 386 IPR003340 GO:0003677
Bva06g02047 404 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 225 388 - -
Bva06g02047 404 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 9 155 - -
Bva06g02047 404 SUPERFAMILY DNA-binding pseudobarrel domain 26 115 IPR015300 -
Bva06g02047 404 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 225 388 IPR044837 -
Bva06g02047 404 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 9 155 IPR044837 -
Bva06g02047 404 MobiDBLite consensus disorder prediction 152 176 - -
Bva06g02047 404 Gene3D - 266 388 IPR015300 -
Bva06g02047 404 ProSiteProfiles B3 DNA-binding domain profile. 23 116 IPR003340 GO:0003677
Bva06g02047 404 MobiDBLite consensus disorder prediction 232 271 - -
Bva06g02047 404 MobiDBLite consensus disorder prediction 249 264 - -
Bva06g02047 404 SUPERFAMILY DNA-binding pseudobarrel domain 287 374 IPR015300 -
Bva06g02047 404 ProSiteProfiles B3 DNA-binding domain profile. 288 386 IPR003340 GO:0003677
Bva06g02047 404 CDD B3_DNA 287 384 IPR003340 GO:0003677
Bva06g02047 404 Pfam B3 DNA binding domain 288 374 IPR003340 GO:0003677
Bva06g02047 404 Pfam B3 DNA binding domain 35 115 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02047 Bva-Chr6 13663549 13666261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02047 1 387 REM Transcription Factor Family AT4G33280 33.663 6.59e-72 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bva06g02047 B3 2.1e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02047 - - gmx:100813851 438.343