Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02045 ATGTTCACAGCTTCACACACAGTGACGCCACCCTTAACGCCTATACCAGACCTGTCCTTGAACATCAGCCCACCATCTATTTCAGACTGTGAAGCAAAAGAGGGAAGCTATAATGGATTCACAAGCAAAACACTTTACCACGAAATGTGCTCAACCTCTGATTCTGGCAGCAGTGGAAGTGATTTAAGCCACGAAAATGACTTTTTCAACCCCGACATTACTAACCTTAGCCATCGTGAGCCCGCATTGAGATTAGGCTTTGAAACCGCGGGTTTGAATCCCCATCCAGTACAAGGTCTCTCAAGAATTCACCTAAACCACCAGCCTCATATCTATGGGCGTGACTTCAAGCGAAATGCAAGAGTCATTACTGGAGTGAAAAGAAGCATCAGAGCCCCCAGAATGAGATGGACTACAACCCTACATGCTCATTTTGTTCATGCGGTTCAGCTTCTGGGCGGTCATGAAAGGGCCACACCAAAGTCCGTGTTAGAGCTGATGAATGTTAAGGATCTAACCCTAGCCCATGTCAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGCACTGACAAAGGTACAGGTCATGGGCAGACAGATATTGGCTTCACCCAAAGGCCACAAACCGTCGAAGGACTATCGTCGCCCTGCGAGAGATCCGATCCATCACAGCAGCTGCAAGTATCCCACAGGGCATCATGGCAGTCATTAATAGAGACAAATGCAAATGATACTATACAAAAAACAGAATCTAGTTCGACATATTGTCATCTCAAGGCAAATGAAACCATGgtGGATGGACAAAATGAAGGCCTGTCGAGTAGCGCGAAGGAGAGGTTGGATTCTAGCTCTTTGTCACGTTCGGATATGATGCTTAACCTAGAATTTACCCTTGGAAGACCCACTTGGCAAACGGACAGTGCCGAATCTTCAACGGAGCTAACTCTTCTCAAGTGTTA 959 0.4619 MFTASHTVTPPLTPIPDLSLNISPPSISDCEAKEGSYNGFTSKTLYHEMCSTSDSGSSGSDLSHENDFFNPDITNLSHREPALRLGFETAGLNPHPVQGLSRIHLNHQPHIYGRDFKRNARVITGVKRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKGTGHGQTDIGFTQRPQTVEGLSSPCERSDPSQQLQVSHRASWQSLIETNANDTIQKTESSSTYCHLKANETMVDGQNEGLSSSAKERLDSSSLSRSDMMLNLEFTLGRPTWQTDSAESSTELTLLKC 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02045 319 SUPERFAMILY Homeodomain-like 130 187 IPR009057 -
Bva06g02045 319 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 319 - -
Bva06g02045 319 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 133 186 IPR006447 GO:0003677
Bva06g02045 319 Gene3D - 132 189 - -
Bva06g02045 319 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 319 IPR044847 GO:0000976|GO:0006355|GO:0010158
Bva06g02045 319 Pfam Myb-like DNA-binding domain 134 185 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02045 Bva-Chr6 13651478 13654859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02045 15 206 G2-like Transcription Factor Family AT5G42630 58.549 4.10e-55 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva06g02045 Myb_DNA-binding 1.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02045 - - vvi:100259077 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00770 10 6203251 6206806 Bva06g02045 06 13651478 13654859 BWGD
Bva06g02045 06 13651478 13654859 Bva06g02045 06 13651478 13654859 ECH