Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02004 ATGGAAATGCAGCGACTACTGTTCAAGACTGCTTTAATCCTGCTCTTTCTTCAGTTTGGTTTAGCCCGGCAAATGCCCTTGAGCTCTAGAATTGAATGGCTGGCGTTACTTGAGCTCCGGTCATCACTGGGTATTAGAGGCAAGGAATGGCCCATAAAGGCTCCACCTTGTTCTACCTGGCCTGGGGTTTACTGCCAAAACGGTCGAGTAGTTGGCCTCAATGTATCTGGCTTAAGACGAACACATGCTGCGAGTCTCCATTCTCGCTTCACCGCGGATTCTCTTGCGAATTTCACCTTTTTATCGTCATTCAATGCTTCTGGGTTTTTTCTCAATGGGTCCATTCCTGATTGGTTTGGCTATAGCCTCGCTGCACTCCAAGTGCTCGATCTGAGTTCTTGCTCGCTTACCGGTTTAATTCCCTCGTCCCTTGGGAATTTGAGCCGATTGAATTACTTGTCTCTATCTGGTAATAGTCTCACTGGTAGAACGCCTTCGACATTAGGACAGTTATCGAGGCTATCAGTGCTTAATCTCTCAAGGAATTCGTTGACTGGATCAATACCTTCCTCTTTCTCGTCTCTTCGCAATCTTACTAAGCTTgatatttcttctaattttttatctggGTCAGTCCCAGACAGTCTTGGTGACCTTTCTAGCCTCAAATTATTGAGTCTTTCCGATAATGGCCTCACGGCTTCAATCCCAGCTCAACTGGCTAAACTTTTCCAGTTGGTTAAACTTGATCTTAGCAAGAATTCATTGTCCGGGCCATTGCCCGATAGTTTGTTTTCTAATCTTCTTGCCCTTGAAACTCTCTCTCTTGCTTACAACGATTTTGATGGCACTCTTCCTGCTGTATTGTGGTCAATGCCCAACTTGGTGTTTCTTGATGTATCCAGCAATGAGTTGACTGGCCCCTTGCCACAAATTACTTCGAACATTAATACTTCTCTTGTCTTATTTAATCTCTCAAACAATCTGTTCTATGGATTCCTGAACACTTCGCTAAATAAGTTTCAGAGAATTTATTTGTCCAGTAATTATTTCCAAGGTGAGGGGCAAAGTGTTGGTTTAAACAATGCATCTCTGGCTAACAATTGCCTGGAGAAGGTTCCAAATCAGAGAAGTTTCCAAAACTGTAGACTGTTTTATGTTCAAAGAAACTTGAATTTCAGTAATGCTGGTGGCCAAGAACGAACTCTGTCGCCATTGCCACAATTGGAGTCAAGAAACAACAAACAAGTTATATTCATCCTTGCCGGTATATTTGGTGGGCTTGGCTTTATTTCGCTTCTAGCGCTGGTCCTCATACTGCTTCtaagaaaatgtaataaaagCATTGCAAGTCAAAGAGAGACAGCGAATGTGGGACATATTCCAGAAGGAGAAAACCAAAGAACTCCAAAGGATCCTGTTATTTTGACTGGATTCGGAGAGTCATTTACTTATGAGCAAATGCTCTGTTCGACTGGTAATTTTGCTGAAGCAAATATAATCAAACGTGGTCATTCTGGAGACCTCTTCCGAGGAATTTTGGAAGGTGGAGTAACTGTGGTAGTCAAAAAGGTAGATCTGAATTTAATCAAGAGAGAATCCTACTTGGTGGAACTGGAGCTGTTGAGCAAGGTTTCACACCCAAGATTGGTCCCGCTCTTGGGGCACTGCTCggagaatgagaatgagaaattcttaatttacgaGTATATGCCTAATGGTGACTTGGCTACTTCGTTGCATAGAGTGACTGGTCCAGCTGATAAGTTACAGTCCCTAGATTGGATTACGAGATTGAAAATTGCAATTGGAGCTGCTGAGGCCCTGTCTTACCTACACGAGTGCAGTCCTCCCCTTGTTCATAGAGATGTCCAGGCAAGCAGTATCCTACTTGAAGATAATTTTGAAGTGCGCCTTGGAAGTTTAAGTGAGGTTACTTCCCAAGGAGATCTTCCCCAGAGTGTCATAACAAAGTTCTTCCGCAAGCCGCAATCTTCTGATCAAGGCACTTCTGGTTTATCGTCTGTGACTTGTACTTATGATGTCTACTGTTTTGGGAAGGTCTTACTTGAACTTGTTACTGGTAATCTCGATGTCAGCAAATCAGATGATGCTAGCACAGGAGAATGGTTGGAGCAGACGCTGTCTTACATCAGCATATATGATAAAGAACTAGTGTATAAGATTGTTGACCCATCTCTGATCGTAGATGAGGACTTGTTAGAAGAGGTGTGGGCAATGGCCATTGTGGCCAGGTCATGCCTGAATCCCAAGCCTTCCAAACGCCCTCCAATGAGACATGTCCTCAAAGCACTGGAAAATCCACTGAAGGTAGTAAGAGAAGAATATTCAAGCTCAGCGAGATTGAGAACAACTTCATCTAGGAGATCATGGAGCACTGCATTCTTTGGTAGCTGGAGACAGAGTTCATCAGAGAGTGCCACTGCCCCAGGGCATACAAGCAGGGAAAGAGATGGTATAAGTGGCTTAAAACAATCAGGAAGGGTCGGTTCTCACGGTAGTGGTGGAAATGAACATTCATCTTCCAATAAAAGGTCATCCAATGAAATTTTCCCTGAACCATTGGAAATGCAAGGAGAGGAGAGGCAAGAGCAAGATCAGCGTTG 2627 0.4279 MEMQRLLFKTALILLFLQFGLARQMPLSSRIEWLALLELRSSLGIRGKEWPIKAPPCSTWPGVYCQNGRVVGLNVSGLRRTHAASLHSRFTADSLANFTFLSSFNASGFFLNGSIPDWFGYSLAALQVLDLSSCSLTGLIPSSLGNLSRLNYLSLSGNSLTGRTPSTLGQLSRLSVLNLSRNSLTGSIPSSFSSLRNLTKLDISSNFLSGSVPDSLGDLSSLKLLSLSDNGLTASIPAQLAKLFQLVKLDLSKNSLSGPLPDSLFSNLLALETLSLAYNDFDGTLPAVLWSMPNLVFLDVSSNELTGPLPQITSNINTSLVLFNLSNNLFYGFLNTSLNKFQRIYLSSNYFQGEGQSVGLNNASLANNCLEKVPNQRSFQNCRLFYVQRNLNFSNAGGQERTLSPLPQLESRNNKQVIFILAGIFGGLGFISLLALVLILLLRKCNKSIASQRETANVGHIPEGENQRTPKDPVILTGFGESFTYEQMLCSTGNFAEANIIKRGHSGDLFRGILEGGVTVVVKKVDLNLIKRESYLVELELLSKVSHPRLVPLLGHCSENENEKFLIYEYMPNGDLATSLHRVTGPADKLQSLDWITRLKIAIGAAEALSYLHECSPPLVHRDVQASSILLEDNFEVRLGSLSEVTSQGDLPQSVITKFFRKPQSSDQGTSGLSSVTCTYDVYCFGKVLLELVTGNLDVSKSDDASTGEWLEQTLSYISIYDKELVYKIVDPSLIVDEDLLEEVWAMAIVARSCLNPKPSKRPPMRHVLKALENPLKVVREEYSSSARLRTTSSRRSWSTAFFGSWRQSSSESATAPGHTSRERDGISGLKQSGRVGSHGSGGNEHSSSNKRSSNEIFPEPLEMQGEERQEQDQR 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02004 875 MobiDBLite consensus disorder prediction 834 856 - -
Bva06g02004 875 Gene3D Transferase(Phosphotransferase) domain 1 571 793 - -
Bva06g02004 875 PANTHER RECEPTOR-LIKE PROTEIN 55 3 265 - -
Bva06g02004 875 Pfam Protein tyrosine and serine/threonine kinase 500 771 IPR001245 GO:0004672|GO:0006468
Bva06g02004 875 Pfam Leucine Rich Repeat 126 147 IPR001611 GO:0005515
Bva06g02004 875 SUPERFAMILY RNI-like 98 356 - -
Bva06g02004 875 SMART LRR_typ_2 243 267 IPR003591 -
Bva06g02004 875 SMART LRR_typ_2 123 146 IPR003591 -
Bva06g02004 875 SMART LRR_typ_2 171 194 IPR003591 -
Bva06g02004 875 SMART LRR_typ_2 219 242 IPR003591 -
Bva06g02004 875 SMART LRR_typ_2 195 218 IPR003591 -
Bva06g02004 875 SMART LRR_typ_2 292 315 IPR003591 -
Bva06g02004 875 SMART LRR_typ_2 147 170 IPR003591 -
Bva06g02004 875 PANTHER RECEPTOR-LIKE PROTEIN 55 283 826 - -
Bva06g02004 875 ProSiteProfiles Protein kinase domain profile. 495 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02004 875 MobiDBLite consensus disorder prediction 809 875 - -
Bva06g02004 875 Gene3D Ribonuclease Inhibitor 31 190 IPR032675 -
Bva06g02004 875 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 283 826 - -
Bva06g02004 875 SUPERFAMILY Protein kinase-like (PK-like) 473 772 IPR011009 -
Bva06g02004 875 Pfam Leucine rich repeat 173 232 IPR001611 GO:0005515
Bva06g02004 875 Pfam Leucine rich repeat 245 305 IPR001611 GO:0005515
Bva06g02004 875 ProSiteProfiles cAMP/cGMP binding motif profile. 500 549 IPR000595 -
Bva06g02004 875 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 3 265 - -
Bva06g02004 875 Gene3D Phosphorylase Kinase; domain 1 464 570 - -
Bva06g02004 875 Gene3D Ribonuclease Inhibitor 191 413 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02004 Bva-Chr6 13433430 13437965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02004 32 664 Miscellaneous Gene Families AT2G16250 49.398 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Bva06g02004 PK_Tyr_Ser-Thr 2.2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02004 - - cam:101513491 1018.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02004 06 13433430 13437965 Bva06g02004 06 13433430 13437965 ECH