Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01950 ATGCAGGATGGAGGTTGTTGTCCGACGATGGATCTGCTACGTTCGGAGCCAATGCAACTGGTGCAACTTATAATTCCGATCGAATCAGTTCGCCGAGCAATCTCGTACCTTGGTGATCTCGGCCTCTTCCAATTCAAAGATCTTAATGCAGAAAAAAGTCCATTCCAACGGACGTATGCTGCTCAGGTTAAAAGATGCGGGGAAATGGCACGTAAGCTGCGGTTTTTTAAAGAACAAATAACAAAGTCTGGTGTATCAATCCCAACAAGGCCAACGAGAGATAGCATAATTGATCTGGACAATTTAGAGGCTAAACTTGCAGAACTCGAAGCTGAACTACTTGAGATTAATGCAAACAATGAGAAGTTGCAAAATACTTATAATGAGCATCTAGAGTATAAACTAGTTCTACAAAAGGCTGGTGAGTTTTTTTCATCAGCAAAAAATGCCGCTGCTGCTCACCAGAGAGAATTTGAAGTCCAGAACACCGTGGAAGGGTCCATTGACAGTCCCTTATTGTTGGaacaaGAGATGACAACAGATCCTTCAAAGCTGATTAGGCTAGGATATATCAGCGGCCTCGTTCCGAGAGAAAAAGCGATGGCTTTTGAAAGGATTTTATTCCGTGCAACTAGGGGTAATGTTTTTCTGAAGCAAGCGGTGGTTGAGCATCCTGTTGTTGATCCTTTGTCGGGAGAGAAGGTTGATAAAAATGCGTTCGTTGTTTTTTATTCTGGAGAGAGAgctaaaagtaaaattctgaaaatatgTGATGCTTTCGGAGCCAATCGTTATCCTTTCACAGATGACATAGGCAAACAATTTCAGATGATTAATGAGGTGTCTGGAAGACTTTTGGAATTGAAGACTACCATTGATGTTGGACAGCTCCACTGGAGCAATCTGCTGCAGACAATCGCATATCAATATGAGCAGTGGAGCCTCCTGgtgaagaaggaaaaatccaTTCACCACATTCTAAATATGCTTAGCATTGATGTGACGAAAAAATGTCTCGTTGCAGAAGGTTGGTGTCCTGTTATTGCAACAAATCAGATTCAACTTGCATTACAACGGGCAACTGCGGACAGTAACTCGCAAGTTGGGGCCATATTTCAGATTCTACAAACAAAGGAACCGCCACCTACGTATTTCCGCACAAACAAATTTACTTCTTCCTTTCAAGAAATTGTAGATGCTTATGGAGTCGCCAAGTATCGGGAGGCAAATCCTGGTGTATACACAATCATCACATTCCCATTCCTTTTTGCTGTAATGTTTGGTGATTGGGGACACGGTATCTGCTTATTGCTGgctactttttattttataatcagagaaaagaaattttctagTCAGAAACTTGGGGACATTGTAGAAATGACATTTGGTGGCCGCTATGTCATTATGATGATGGCACTGTTCTCGATCTACACAGGATTGTTATACAATGAATTCTTTTCTGTTCCGTTTGAACTATTTGGGCCATCTGCCTATGGATGCCGAGATCTTTCGTGCAGGGATGCTTCCACAGCAGGTTTAATAAAGGTGCGTAGAACATATCCATTCGGTGTGGATCCTAAATGGCATGGTACCCGGAGCGAATTGccatttcttaattctttgaagatgaagatgtcAATCCTATTGGGAGTCACCCAAATGAACCTTGGAATTATATTAAGTTACTATAATGCAAAATATTTTGGGAATGGCGTAAATATCTGGCACCAGTTTGTTCCCCAGATGATATTCTTAAACAGCCTGTTTGGCTATCTTTCATTGCTGATAATTGTCAAGTGGTGCACTGGATCACAAGCTGACCTATATCATGTGATGATATACATGTTCCTTAGTCCAACCGATGATCTAGGTGAAAACCAGCTCTTTGTTGGCCAAAAGTTCCTTCAACTTGTATTACTATGGTCGGCACTTGTTGCTGTACCTTGGATGTTGCTGCCAAAACCCTTCCTCTTGAAGAAGCAACATGAAGAAAGGCATCAAGGTCAAGCTTACTCGTTGCTTTACAGCACTGAAGATCCTCTGGAATCAGAGACATGTAGCATTCCCCATGACAACGGGGAGTTTGATTTCAGTGAAGTTTTTGTACACCAACTCATACATACAATAGAATTTGTGCTTGGAGCAGTGTCCAATACAGCTTCCTATCTACGTCTATGGGCCCTCAgTCTAGCACATTCAGAGCTGTCAAGTGTATTCTATGACAAAGTTCTACTTCTGGCTTGGGGGTTCAACAACACCGTTATTCTCATAATTggcattattgtttttatatttgcaACTGTTGGTGTTCTACTTGTAATGGAAACTCTAAGTGCTTTCTTGCATGCTTTACGGCTTCACTGGGTGGAGTTCCAGAACAAGTTTTATGAAGGAGACGGTTACAAGTTCTACCCGTTTTCATTTGCTTCACTTAATGACGAGGATGAGTTATA 2456 0.3974 MQDGGCCPTMDLLRSEPMQLVQLIIPIESVRRAISYLGDLGLFQFKDLNAEKSPFQRTYAAQVKRCGEMARKLRFFKEQITKSGVSIPTRPTRDSIIDLDNLEAKLAELEAELLEINANNEKLQNTYNEHLEYKLVLQKAGEFFSSAKNAAAAHQREFEVQNTVEGSIDSPLLLEQEMTTDPSKLIRLGYISGLVPREKAMAFERILFRATRGNVFLKQAVVEHPVVDPLSGEKVDKNAFVVFYSGERAKSKILKICDAFGANRYPFTDDIGKQFQMINEVSGRLLELKTTIDVGQLHWSNLLQTIAYQYEQWSLLVKKEKSIHHILNMLSIDVTKKCLVAEGWCPVIATNQIQLALQRATADSNSQVGAIFQILQTKEPPPTYFRTNKFTSSFQEIVDAYGVAKYREANPGVYTIITFPFLFAVMFGDWGHGICLLLATFYFIIREKKFSSQKLGDIVEMTFGGRYVIMMMALFSIYTGLLYNEFFSVPFELFGPSAYGCRDLSCRDASTAGLIKVRRTYPFGVDPKWHGTRSELPFLNSLKMKMSILLGVTQMNLGIILSYYNAKYFGNGVNIWHQFVPQMIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDDLGENQLFVGQKFLQLVLLWSALVAVPWMLLPKPFLLKKQHEERHQGQAYSLLYSTEDPLESETCSIPHDNGEFDFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFNNTVILIIGIIVFIFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFYPFSFASLNDEDEL 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01950 818 Pfam V-type ATPase 116kDa subunit family 36 809 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bva06g01950 818 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 4 817 - -
Bva06g01950 818 PANTHER VACUOLAR PROTON ATPASES 4 817 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bva06g01950 818 Coils Coil 92 126 - -
Bva06g01950 818 PIRSF ATP6V0A1 8 818 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01950 Bva-Chr6 13192869 13200248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01950 10 817 Primary Pumps ATPases(2) AT4G39080 74.660 0.0 1254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01950 K02154 - jre:109008274 1353.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01950 06 13192869 13200248 Bva06g01950 06 13192869 13200248 ECH