Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01941 ATGGCGGAAGAGATTAGCAAGAGCGACTTAGGATCATCTGCTACAAGTGCCGCAAAAACCAGTCTTTTCTGGCCTTCTGTTCTCCGTTGGATTCCCACTTCCACCGATCACATCATTGCTGCTGAGAAACGACTTCTCTCTCTTGTCAAGACTCCCTATGTTCAAGAACAGGTCAATATAGGCTCTGGACCACCTGGGTCAAGAGTTAGATGGTTTCGGTCATCAAGCAACGAGCCAAGATTTATTAATACTGTCACATTTGACGGCAAAGATGATTCTCCTACACTTGTAATGGTTCATGGATATGCTGCTTCCCAGGGTTTCTTCTTCCGTAACTTTGATGCTCTTGCCAGTCATTTCAGAGTCATTGCTGTTGATCAACTTGGGTGGGGTGGATCAAGCAGGCCTGACTTTACATGCAGAAGCACTGAAGAAACTGAGGCATGGTTCATTGACTCTTTTGAGGAATGGAGAAAAGCGAAAAACCTTACCAATTTTATATTACTAGGACATTCATTTGGTGGTTATGTTGCTGCTAAATATGCGCTCAAGcacCCTGAGCACATAAAGCACTTGATTTTGGTGGGATCTGCTGGATTTTCATCAGAATCAGACGTCAAGTCTGAGTGGATTACACGGTTCAGAGCAACATGGAAAGGAGCAATTTTGAATCATCTATGGGAGTCTAATTTTACACCTCAGAAGGTTGTCAGAGGATTAGGTCCATGGGGTCCAGATCTAGTGCGCAGGTATACAAGTGCTAGGTTTGGTACACATTCAACGGGGGACATGTTGACTGAAGAGGAATCAAGATTGCTGACAGATTATGTTTATCATACTTTAGTGGCCAAAGCTAGCGGAGAGCTGTGcttaaagtatatttttgcttttggagCCTTTGCTAGGATGCCCCTTCTTCAGAGTGCCTCGGAGTGGAAGGTGCCAACCACTTTCATGTACGGTTTCCAAGATTGGATGAACTATCAGGGGGCCCAAGAGGCTCGCAAGCACATGAAAGTTCCATGTGAAATCATTAGGGTTCCCCAGGCTGGGCACTTTGCGTTCATTGACAATCCGACAGGCTTCCATTCGGCTGTGCTATACGCTTGTCgaaaatttctttctccaGACCCTGACAATGAACCCTTCCCTGAAGAGTTAGCATCCGCGTA 1172 0.4411 MAEEISKSDLGSSATSAAKTSLFWPSVLRWIPTSTDHIIAAEKRLLSLVKTPYVQEQVNIGSGPPGSRVRWFRSSSNEPRFINTVTFDGKDDSPTLVMVHGYAASQGFFFRNFDALASHFRVIAVDQLGWGGSSRPDFTCRSTEETEAWFIDSFEEWRKAKNLTNFILLGHSFGGYVAAKYALKHPEHIKHLILVGSAGFSSESDVKSEWITRFRATWKGAILNHLWESNFTPQKVVRGLGPWGPDLVRRYTSARFGTHSTGDMLTEEESRLLTDYVYHTLVAKASGELCLKYIFAFGAFARMPLLQSASEWKVPTTFMYGFQDWMNYQGAQEARKHMKVPCEIIRVPQAGHFAFIDNPTGFHSAVLYACRKFLSPDPDNEPFPEELASA 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01941 390 Gene3D alpha/beta hydrolase 80 371 IPR029058 -
Bva06g01941 390 PRINTS Alpha/beta hydrolase fold signature 119 134 IPR000073 -
Bva06g01941 390 PRINTS Alpha/beta hydrolase fold signature 182 195 IPR000073 -
Bva06g01941 390 PRINTS Alpha/beta hydrolase fold signature 168 181 IPR000073 -
Bva06g01941 390 SUPERFAMILY alpha/beta-Hydrolases 85 367 IPR029058 -
Bva06g01941 390 PRINTS Epoxide hydrolase signature 119 134 IPR000639 GO:0003824
Bva06g01941 390 PRINTS Epoxide hydrolase signature 314 330 IPR000639 GO:0003824
Bva06g01941 390 PRINTS Epoxide hydrolase signature 347 369 IPR000639 GO:0003824
Bva06g01941 390 PRINTS Epoxide hydrolase signature 182 195 IPR000639 GO:0003824
Bva06g01941 390 PANTHER BNAA01G13630D PROTEIN 8 377 - -
Bva06g01941 390 PANTHER RE40534P-RELATED 8 377 - -
Bva06g01941 390 Pfam alpha/beta hydrolase fold 94 359 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01941 Bva-Chr6 13144480 13148963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01941 74 213 Acyl Lipid Metabolism Gene Families AT1G64670 31.333 8.97e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01941 - - cpap:110808507 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00881 10 6730905 6735279 Bva06g01941 06 13144480 13148963 BWGD
Bva06g01941 06 13144480 13148963 Bva06g01941 06 13144480 13148963 ECH