Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01935 ATGGATGATGCTGGGCATCGTGAAAATGGAAGGCACAAAGCTGATCAATATAAATCAGCTCAGGGACAGTGGTTGATGCAACATCAACCTTCCATGAAACAGATCATGGCAATAATGGCTGAAAGAGATGCAGCCATTCAAGAAAGAAATCTGGCCCTGTCTGAGAAAAGGGCAGCCCTTGCAGAGCGTGACATGGCATTCCTGCAGCGTGATACTGCCATTGCAGAACGAAATAATGCTATAATGGAAAGAGATAATGCAATTGCAACCTTTCAGTATCGAGAAAACTCTTTAGCCGGCAGTAGCATGTCTTCATGTCCTCCAGGATGCCAAATCTCACGAGGGGTAAAGCACGTGCATCATCCTCAGCAACAGGTGCACCATATACCTCACATGGGTGATGCTTCTTACAGCACACGGGAGATGCACACAAGTGATGCACTTCCCACGGCTCCCATTCCTTCCGAACCTGGGAAGCCACGAAGAGCCAAACGACCGAAGGAGGGTAAATCAATTTCACCTAATAAGAAGACCTCAAAATCTGCAAGAAAGGTCAAGAGAGACAGTGAAGACTTAAATAAGATGATGTTCGGTAAGACAGAGTGGAAGAGTAGTCAAGAAATGGTTAATGGAGGTGATGATCTTAACAAACAGTTAGTGGTGTCAAAGGCTGATTGGAAAGGTCAGGACTTGGGATTGAACCAAGTAGCATATGATGAGTCAACCATGCCAGCGCCAGTATGCTCTTGTACTGGTGCGATGAGGCAGTGCTACAAATGGGGGAATGGGGGTTGGCAGTCTGCTTGTTGCACAACCACCATATCAATGTATCCACTTCCAGCAGTGCCCAACAAAAGGCACGCTCGGATAGGTGGTCGAAAGATGAGTGGAAGTGCTTTCAGTAAGCTGCTGAGCCGACTTGCCGCAGAAGGCCACGATCTGTCAAACCCAGTTGACCTCAAGGACCATTGGGCTAAACATGGTACGAACCGTTATATCACAATTAAGTA 1010 0.4693 MDDAGHRENGRHKADQYKSAQGQWLMQHQPSMKQIMAIMAERDAAIQERNLALSEKRAALAERDMAFLQRDTAIAERNNAIMERDNAIATFQYRENSLAGSSMSSCPPGCQISRGVKHVHHPQQQVHHIPHMGDASYSTREMHTSDALPTAPIPSEPGKPRRAKRPKEGKSISPNKKTSKSARKVKRDSEDLNKMMFGKTEWKSSQEMVNGGDDLNKQLVVSKADWKGQDLGLNQVAYDESTMPAPVCSCTGAMRQCYKWGNGGWQSACCTTTISMYPLPAVPNKRHARIGGRKMSGSAFSKLLSRLAAEGHDLSNPVDLKDHWAKHGTNRYITIK 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01935 336 PANTHER - 1 336 IPR010409 -
Bva06g01935 336 Coils Coil 51 71 - -
Bva06g01935 336 MobiDBLite consensus disorder prediction 136 190 - -
Bva06g01935 336 SMART GAGA_bind_2 1 336 IPR010409 -
Bva06g01935 336 MobiDBLite consensus disorder prediction 158 174 - -
Bva06g01935 336 PANTHER PROTEIN BASIC PENTACYSTEINE6 1 336 - -
Bva06g01935 336 MobiDBLite consensus disorder prediction 1 15 - -
Bva06g01935 336 MobiDBLite consensus disorder prediction 1 21 - -
Bva06g01935 336 Pfam GAGA binding protein-like family 1 336 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01935 Bva-Chr6 13108650 13112035 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01935 65 336 BBR or BPC Transcription factor family AT5G42520 65.854 2.15e-124 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Bva06g01935 GAGA_bind 1.8e-109 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01935 - - gmx:100783502 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01935 06 13108650 13112035 Bva06g01935 06 13108650 13112035 ECH