Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01933 ATGGGAAAATCTACCTCCTGCttcaaattaatcacttgCGGCGGTGATGTGGCGGACAAAGATGATTATGAAGCATCGCAGATCAAAGATTCCAATGACAGACGAGGTTGGAGTTTCCGGAAGAGATCTGCAAGGCATCGTGTACTTAGCAATACTGTGATAACGGAGACCCCATCTTTTGCAAATAAGGAGAATTCTGAATGTGCTAGTGTTATTTTCCAACCACCAGAGAACTCTAATTTTGTTGAGAAGATTTGCACAAGACAATGCTCTTATGATAAACCTGACAAACCCCTGTCATCGTCATTGGCAGAATCACAAATATATGAGCAAGTTGTTATCACTGAAAGTGAAGCTAAGAAGGATGTTAATCCACCAGAATCTGTTGTTATCATCGTCCAGTCTTCCATCAGGGGGTTCTTGGCTCATAGAGACCTGGTAAAGCTTAAGAATGTAGTGAAGTTGCAAGCTGCTGTTCGTGGGCACCTGGTTCGGAGGCATGCTGTAGGAACCCTACGTTGTGTTAAAGCTATTGTTAAAATGCAGCTTCTCGTGCGAGCTCGCCAGGCTCAGAAGTTACATCCAGAAAAGCATTTGAAGCAGAAGCAAAGCAAAATCGATGGCTTAAAAGCTTTGGGGAACGGAAATCATATGACCAAATCAAATGAGACATTCACTTCAATTGAGAAGCTGCTTAGCAATCGCTTTGCTCGTCAGCTGTTGGAATCCACACCAACAAACAAATCTATCCATGTTAAATGTGACCCTTCTAAAGCTGATTCAGCTTGGAAATGGTTGGAGAGATGGATGTCTATTTCATCAACTGATACTGGAGAATCTAAAAAAGGAAGTTCTATGACAGAGCAATTGGATGATTTCAAAGATAGCAGTTCTGTGTCTCAAGTGGAATCAATTCTTCAATCTGAAGATTTTAGTAAGTCAGTTAACCCAAACCTAATGTA 962 0.4085 MGKSTSCFKLITCGGDVADKDDYEASQIKDSNDRRGWSFRKRSARHRVLSNTVITETPSFANKENSECASVIFQPPENSNFVEKICTRQCSYDKPDKPLSSSLAESQIYEQVVITESEAKKDVNPPESVVIIVQSSIRGFLAHRDLVKLKNVVKLQAAVRGHLVRRHAVGTLRCVKAIVKMQLLVRARQAQKLHPEKHLKQKQSKIDGLKALGNGNHMTKSNETFTSIEKLLSNRFARQLLESTPTNKSIHVKCDPSKADSAWKWLERWMSISSTDTGESKKGSSMTEQLDDFKDSSSVSQVESILQSEDFSKSVNPNLM 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01933 320 SMART iq_5 148 169 IPR000048 GO:0005515
Bva06g01933 320 SMART iq_5 125 147 IPR000048 GO:0005515
Bva06g01933 320 PANTHER IQ-DOMAIN 5-RELATED 1 292 - -
Bva06g01933 320 Pfam IQ calmodulin-binding motif 150 167 IPR000048 GO:0005515
Bva06g01933 320 Pfam IQ calmodulin-binding motif 130 145 IPR000048 GO:0005515
Bva06g01933 320 Gene3D - 126 174 - -
Bva06g01933 320 ProSiteProfiles IQ motif profile. 127 154 IPR000048 GO:0005515
Bva06g01933 320 ProSiteProfiles IQ motif profile. 148 177 IPR000048 GO:0005515
Bva06g01933 320 PANTHER PROTEIN IQ-DOMAIN 32 1 292 - -
Bva06g01933 320 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 110 196 IPR027417 -
Bva06g01933 320 MobiDBLite consensus disorder prediction 275 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01933 Bva-Chr6 13091618 13094950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01933 112 272 IQD Protein Family AT1G19870 48.447 2.27e-46 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01933 - - gmx:100799424 397.127