Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01931 atgcgTGGATTGCACAAATCAAAAACAGTTTCATGGGCCTCAGATATCGATCTTTGTCagGAGACTAAGCGCAGGACCTCAGCCACTTCCAACATGGGAGGGCCAAGTCATAGTGATAATTTCCGGAGACGTACCGCTCTTGCATACAGAAGTATCACACTAAAAGAGGAATCTCCTTCGCAAGTTGGGTCAAATTCTCAAGATCACCTCCAAGCAAAAACTTCATTGCTGTTGCATTCAGGCGAAACAAGCCCTGATGACATTCGACCTCCTGGATTTGAGGGAAATATTTCTTCAGATCAGTTGCAGATTAAACCATCCCAAATTCCTGTGATTAGATGGATTGATCCGCCtaagaTTGTGTTGAATTTCACATGGCAAGTTGTGGCTGGGGAGGAAAGCAAAGAGGTAGAGGATGAAAATCAGAGGGAGATGAGAGTACTTGAAGCTATTTATCCTCGCCCATCTTCCATCCCTCCAAACCCCTCTGTCTCAACGGATGTAGAGAACTGTCATTGCATTGATGTTCAAGCACCATCGATACCAATCACACCCATCGAAGACGAAGATGTAGCACTAGATTCATCGTCTGATGTTCCACTAGGTTCGCATCCTTCTTCATTAGTTCCCGGCATGCCTGATTCAAAATCCCCTGCACGCGTTCATGGTGTAGAATCTGATGTAGCTGTAACTAATATCATGAAGAGCAGCGATGAACATGGGAACTCGATTGATCCTGAATTgctaaataaaattctcagcAAGCCTGAAGTAATTGAGAAGTTGGTTAAAGATTACGGAGCTTCTAATAACTTGCAATATGTACCAAATGCAAGGCCAGCTTCAGTGGCTTTTCCAAATCCGCCCGCTCCTGTTAATCAAGCAGAAACCAATGCTGCTTTTTCAGCCAGTCCTTCCTATCCTCAGCCAACGTGGGGTCCAGGGGCGCATATTCCTACACAATGGCTTCCTCCACCTGCTGTCAATCCAGTTCctgtttcttcttctgttgGAGCCCCTCCAACAAAGGATCTTCATTACTACAAGAGCTTAATTCAGCAACATGGAGGTGAAAGGCAAGAGAACCTTTCACACTTCAGTAACCGTCGCATCCAGCAACCAGTTGCAAACCAGGAAACAGCACAAAATTCTAGACCAAGGGAGCCGAAACCGAAGATAATGAAACCTTGTATCTATTTCAACACTCCCAGAGGATGTCGAAACGGAGCTAACTGTGCATACCAGCATGATGTGGCATTCCAGCCAAGGGGTAGTGCTGTGCCCGGCGTGCAAGGTtcaaagagaatgaaaatggaTAGTGAGATTAGCAGTTA 1334 0.4355 MRGLHKSKTVSWASDIDLCQVRLFLSEESPSQVGSNSQDHLQAKTSLLLHSGETSPDDIRPPGFEGNISSDQLQIKPSQIPVIRWIDPPKIVLNFTWQVVAGEESKEVEDENQREMRVLEAIYPRPSSIPPNPSVSTDVENCHCIDVQAPSIPITPIEDEDVALDSSSDVPLGSHPSSLVPGMPDSKSPARVHGVESDVAVTNIMKSSDEHGNSIDPELLNKILSKPEVIEKLVKDYGASNNLQYVPNARPASVAFPNPPAPVNQAETNAAFSASPSYPQPTWGPGAHIPTQWLPPPAVNPVPVSSSVGAPPTKDLHYYKSLIQQHGGERQENLSHFSNRRIQQPVANQETAQNSRPREPKPKIMKPCIYFNTPRGCRNGANCAYQHDVAFQPRGSAVPGVQGSKRMKMDSEISS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01931 415 ProSiteProfiles Zinc finger C3H1-type profile. 362 390 IPR000571 GO:0046872
Bva06g01931 415 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 410 - -
Bva06g01931 415 MobiDBLite consensus disorder prediction 51 71 - -
Bva06g01931 415 MobiDBLite consensus disorder prediction 338 355 - -
Bva06g01931 415 MobiDBLite consensus disorder prediction 338 365 - -
Bva06g01931 415 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6 1 410 - -
Bva06g01931 415 MobiDBLite consensus disorder prediction 396 415 - -
Bva06g01931 415 MobiDBLite consensus disorder prediction 165 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01931 Bva-Chr6 13085532 13090196 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bva06g01931 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01931 - - adu:107460053 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01931 06 13085532 13090196 Bva06g01931 06 13085532 13090196 ECH