Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01924 ATGTCAGCCGGAGTCGGAAAATGCAGCAAAATCCGGCACATTGTTAGGCTGCGCCAAATGCTGCGACGGTGGCGCAACAAGGCTCGCATGTCAGCGAATCTTACGCCGGCCGATGTTCCGGCAGGACACGTGGCAGTGTGCGTGGGCGCAAACTATAAGAGATTCGTAGTGCGGGCGACGCACCTGAACCACCCACTGTTCAAGAAGCTACTGGTGGAAGCAGAGGAAGAGTACGGATTCCGTAACCATGGGCCATTGGCGATCCCGTGCGAGGAAGCAGTGTTCGAAGAGGTACTCCGCTTCATTTCGCGATCCGACTCAACAAACTCGTCCCGATTCGCAAACCTCGACGACTTTTACAGGTACTGCCACCTAGGAATTAGGACCAATATCGACTTGTGGCCAGAATCTCGACCTTTGCTTCACTG 428 0.5467 MSAGVGKCSKIRHIVRLRQMLRRWRNKARMSANLTPADVPAGHVAVCVGANYKRFVVRATHLNHPLFKKLLVEAEEEYGFRNHGPLAIPCEEAVFEEVLRFISRSDSTNSSRFANLDDFYRYCHLGIRTNIDLWPESRPLLH 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01924 142 Pfam Auxin responsive protein 16 101 IPR003676 GO:0009733
Bva06g01924 142 PANTHER SMALL AUXIN-UP RNA-RELATED 6 140 - -
Bva06g01924 142 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 140 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01924 Bva-Chr6 13062125 13062905 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01924 5 141 Calmodulin-binding Proteins AT4G34750 52.414 1.45e-46 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01924 K14488 - csv:101216342 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01924 06 13062125 13062905 Bva06g01924 06 13062125 13062905 ECH