Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01922 ATGGACCGACGCTGGCCCTGGAAGAAAAAATCATCAGACAAGGCAGTGCTTGAGAAAGCAGTCGCGGCTTTGGACTCTGCTAATGGTTCTACCCCGAGCAATCAGGGTAATTACAAAAAGCCAAACTATGTTCAAATTTCTGTGGAGTCATATTCACACCTCACTGGTCTGGAAGATCAAGTGAAGACATATGAGGAAAAAACTCAGACATTGGAGGATGAGATTAAGGAATTGAATGAAAACCTGTCAGCCTCAAATTCAGAGATAACTACCAAGGAAAACATGGTAAAACAACATGCTAAAGTTGCTGAAGAAGCTGTCTCAGGCTGGGAAAAGGCTGAAGCAGAAGCTCTGGCATTGAAGAATCATCTAGAAACTGTCACTCTTTCAAAGCTCACTGCTGAGGATCGTGCAGCACATCTAGATGGAGCTCTTAAAGAGTGCATGCGACAGATAAGAAACCTGAAAGAAGAGCACGAACAAAAAATACAGGAAGTTGCTCTCACCAAAACCAAGCAATTGGACAAGATCAAGGGTGAGCTTGAGGCAAAGATCGTTAACTTAGAACAGGAACTACTTAGGTCTGCTGCTGAAAACGAGGCTCTTTCAAGGTCATTGCAGGAGCGCTCTAACATGCTAATCAAAATAAGCGAAGAAAAAGCTCAGGCTGAGGCTGAAATTGAGCTTTTGAAGGGCAACATAGAATCTtgtgagagagaaataaattcACTTAAATATGAACTTCATGTTGTTTCCAAAGAGCTTGAGATtcgcaatgaagaaaagaatatgagTATAAGATCTGCAGAAGCTGCTAACAAACAGCATATGGAGGGTGTCAAAAAAATTGCTAAGCTAGAGGCAGAGTGCCAAAGATTACGTGGCCTTGTGAGGAAGAAGTTACCTGGTCCTGCTGCACTGGCACAGATGAAGCTAGAGGTTGAGAGTCTAGGCCGAGATTATGGAGAAACTCGATTAAGAAGGTCCCCAGTCAAGCCTTCTAGTCCACACATGTCACCAGTGCCTGAGTTCTCCCTAGACAATGTACAGAAATTCCAGAAGGAGAACGAGTTTCTTACAGAGCGTTTATTgtcaatggaagaagaaacaaagatgCTGAAAGAAGCTTTGGCAAAACGTAACAGTGAATTGCAAGCTTCAAGGAGCATGTGTGCTAAAACGCTGAGCAGACTTCAAAGCTTGGAAACACAACTTCACACAGGTAATCAGCAGAAAGGATCTCCAAAATCCGTAGTCCAGATAACCCATGAAAGTATTTATAGTCAAAATGCAAGCAGCGCACCAAGTTTAACCTCTATGTCCGAAGATGGAAATGATGATGCAGGAAGTTGTGCGGAGTCTTGGGCCACAGGATCAATGTCTGAGCTATCCCAATTccggaaagaaaagaatactaACAAATCAAGCAAAGCTGAAGCCACTAATAAGTTAGAACTGATGGATGACTTCCTGGAGGTAGAGAAGCTGGCTCGTTTATCAAATGGTTCCAATGGAGATACGTCTGTTTCAGTTTCTACAAACAATAAGATATCAGAAACGGTGACAAGTGATGTATCAAGCGAGGTCATTACTGGTAAAGATGATCCCTCCGAAAAACAAGGTGATTCGGACCCATTGCCAAATCAGGTATCTTCTGATGTAGCATTGTCGGTATCTGATCCTGGTTCTGATGCTGATAACTTGCCCTTGACAAAGCTTCGGTCAAGAATACTCTTGGTTTTTGAGTCCATGTCTAAGGATGGTGATGTAGGGAAAATTTTGGAGGATATTAAACACATTCTGGAGGATGCACATGACACTTCAATCCAGCAATCTGTGCGTTGCATTCGCCAAGATGTCCGATCTACTGACACTACATGTGATAGGCAGGCTAACCCTGAAGATGCCGGCTTAACACTTAAAACAGAATATGTGCAGATAACTCCAGATTTGGAAGGTGCAATTTCTCAGGTTCATGACTTCGTATTGTGTCTTGGCAGAGAAGCAATGACAGTCCATGACATAGCTTCTGATGGGAATGGAATGAGCCAAAAGATTGAGGACTTCTCTATCAcctttaataaagttttatgCAAGAAAGCAAGCTTATTACAATTTGTTCTTGACCTATCCTATGTTTTAGCAAAAGCCAgtgaattcaaatttaacttcCTTGGGTACAAGGGCACTGAAACTGAAGTTAACAGTCCTGATTGCATAGACAAGATTGCTTTGCCAGAAAATAAGTTAGTCCAACAAGAGAACTCATCAGGAGAAAGATATCAAAATGGTTGTTCCCATATGCTTAATCCCTGTTCTGATCGTGAGGTTCCTGACGATGGAAATTTGGTTTCGGGTTATGAATCAAATTCTATATCACAAAAATTCTCAATGGAGGAGTTTGAAGTATTGAAactagagaaagagaaggcgGCAAAGGATCTGTCAACATGTATTGAAAATCTTGAAACGACGAAGTCTCATTTACTAGAAACAGAACAACTTCTAGCGGAAGTTAAATCGCAGTTGTCATCTGCTCAAAGATCGAACAGCTTAGCTGAGACACAGCTGAAATGTATGGCTGAGTCGTACAGGTCACTTGAGGCACGTGCACAGGAGTTGGAAACTGAGCTGAATCTTTTGCGTGTAAAGACAGAAACTTTGGAGAATGAACTTCAAGATGAAAAGAGGGGTCATGAAGAAACTCTGACCAAGTGCAAGGAGCTAGAAGAGCAATTGCAAAGGAATGAGAGCGCAGCAGCTGATATTGAGCTTAAAACTAAGCAGGAGAGAGATTTGACAGCTGCTGCTGAAAAACTAGCTGAGTGTCAGGAAACTATATTTCTTCTTGGCAAGCAGCTGACTGCTCTGCGTCCACAAACAGATCAAATCGGATCTCCGTTCAGTGAGAGAAGTCCAAAGATTGAAGGTTTTACTGTGGATGAACCTACTACTAGTAGCTTAAATTTGCAAGAGTTTGACCAGGCAGGGATGGATAATACTGTTTCTGGTATCATGCAAAGGCTGGATATGGAGTCCCCTTTGCATTTTTCCAACACCTTATGTAGTCCATCAGATAATGAGACAAACCATTCTCCATTGAAGCATCCAAAACACAGGCCTACCAAGTCAGCCTCTTCATCAGCTTCTTCCACCCCTACACCAGAGAAACATGCACGAGGGTTTAGTAGATTCTTTTCATCCAAAGGAAAAACCAGTCACTG 3224 0.4057 MDRRWPWKKKSSDKAVLEKAVAALDSANGSTPSNQGNYKKPNYVQISVESYSHLTGLEDQVKTYEEKTQTLEDEIKELNENLSASNSEITTKENMVKQHAKVAEEAVSGWEKAEAEALALKNHLETVTLSKLTAEDRAAHLDGALKECMRQIRNLKEEHEQKIQEVALTKTKQLDKIKGELEAKIVNLEQELLRSAAENEALSRSLQERSNMLIKISEEKAQAEAEIELLKGNIESCEREINSLKYELHVVSKELEIRNEEKNMSIRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGRDYGETRLRRSPVKPSSPHMSPVPEFSLDNVQKFQKENEFLTERLLSMEEETKMLKEALAKRNSELQASRSMCAKTLSRLQSLETQLHTGNQQKGSPKSVVQITHESIYSQNASSAPSLTSMSEDGNDDAGSCAESWATGSMSELSQFRKEKNTNKSSKAEATNKLELMDDFLEVEKLARLSNGSNGDTSVSVSTNNKISETVTSDVSSEVITGKDDPSEKQGDSDPLPNQVSSDVALSVSDPGSDADNLPLTKLRSRILLVFESMSKDGDVGKILEDIKHILEDAHDTSIQQSVRCIRQDVRSTDTTCDRQANPEDAGLTLKTEYVQITPDLEGAISQVHDFVLCLGREAMTVHDIASDGNGMSQKIEDFSITFNKVLCKKASLLQFVLDLSYVLAKASEFKFNFLGYKGTETEVNSPDCIDKIALPENKLVQQENSSGERYQNGCSHMLNPCSDREVPDDGNLVSGYESNSISQKFSMEEFEVLKLEKEKAAKDLSTCIENLETTKSHLLETEQLLAEVKSQLSSAQRSNSLAETQLKCMAESYRSLEARAQELETELNLLRVKTETLENELQDEKRGHEETLTKCKELEEQLQRNESAAADIELKTKQERDLTAAAEKLAECQETIFLLGKQLTALRPQTDQIGSPFSERSPKIEGFTVDEPTTSSLNLQEFDQAGMDNTVSGIMQRLDMESPLHFSNTLCSPSDNETNHSPLKHPKHRPTKSASSSASSTPTPEKHARGFSRFFSSKGKTSH 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01922 1074 MobiDBLite consensus disorder prediction 542 558 - -
Bva06g01922 1074 MobiDBLite consensus disorder prediction 962 983 - -
Bva06g01922 1074 MobiDBLite consensus disorder prediction 1043 1057 - -
Bva06g01922 1074 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1074 - -
Bva06g01922 1074 Coils Coil 349 376 - -
Bva06g01922 1074 MobiDBLite consensus disorder prediction 429 445 - -
Bva06g01922 1074 Pfam Filament-like plant protein, long coiled-coil 92 963 IPR008587 -
Bva06g01922 1074 Coils Coil 54 95 - -
Bva06g01922 1074 Coils Coil 829 946 - -
Bva06g01922 1074 MobiDBLite consensus disorder prediction 1016 1030 - -
Bva06g01922 1074 MobiDBLite consensus disorder prediction 429 453 - -
Bva06g01922 1074 SUPERFAMILY Tropomyosin 799 960 - -
Bva06g01922 1074 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 1074 - -
Bva06g01922 1074 MobiDBLite consensus disorder prediction 501 567 - -
Bva06g01922 1074 MobiDBLite consensus disorder prediction 501 530 - -
Bva06g01922 1074 MobiDBLite consensus disorder prediction 1016 1074 - -
Bva06g01922 1074 Coils Coil 138 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01922 Bva-Chr6 13050322 13056297 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01922 - - gmx:100789174 1538.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00901 10 6848382 6854177 Bva06g01922 06 13050322 13056297 BWGD
Bva06g01922 06 13050322 13056297 Bva06g01922 06 13050322 13056297 ECH