Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01921 ATGGctttaagaaaatcaaacaagcTTGCTCAAACAGCAGTTCTTAAACAAATTCTCAAGAGATGTTCCAGTTTAGGGAGGAAACAAGGCTACGATGATCAAGGCCTCCCTTTGGACGTACCCAAGGGTCATTTTGTTGTATATGTTGGAGAAAATAGGAGTAGATACATTGTTCCAATCTCTTATCTCAGCCGTCCAGAGTTCCAAAACCTGCTCCATCAAGCAGAAGAAGAGTTTGGCTTTGATCACGGAAGGGGTCTGACCATTCCCTGTGAACAAGTTATTTTTGAGTCTCTTACATCCATGCTCAGATA 314 0.3981 MALRKSNKLAQTAVLKQILKRCSSLGRKQGYDDQGLPLDVPKGHFVVYVGENRSRYIVPISYLSRPEFQNLLHQAEEEFGFDHGRGLTIPCEQVIFESLTSMLR 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01921 104 Pfam Auxin responsive protein 27 103 IPR003676 GO:0009733
Bva06g01921 104 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 104 IPR003676 GO:0009733
Bva06g01921 104 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01921 Bva-Chr6 13046882 13047196 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01921 5 103 Calmodulin-binding Proteins AT4G34750 38.384 2.10e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01921 K14488 - tcc:18591528 191.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01921 06 13046882 13047196 Bva08g00842 08 4327466 4327892 ECH
Bva06g01921 06 13046882 13047196 Bva06g01921 06 13046882 13047196 ECH