Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01915 ATGGCTCGACTAACTTTCTTGTCCGAGCCCAAAGAGCAAGAATCAAACTCAAAACGCAAGCGAAAGCAGAAACCACCGTCTTCATGGGACCAAATCAAGAACCTCCTCCCCTGCAAACAGATACAAGGGTCCAGAGTCTACGACCCGTCCAAAAACGGCCCCATAGTAGCTGCCCACTCAAAGCTAGGATCTTCTTGCAGCTCTATCTGTAGCTTCAGAGACGTTGTTCGTGGCAACACACGGGTTGTTCACAGGGTTGATAATTCCTCTCCGGAGAACAGCACCGTGGGTCAGGAAACTTGGCTACCGAGTCGGAAGCCACTCACTGGGTCATCAGGCTCCGGAAAATCTCACGGCGGTACAACATCTTCGAGAGGGATGCAATTCAGGAAGCTCTCCGGGTGCTACGAATGCCACACCATCGTTGACCCTAGCagGCTCCCAATTCCAAGGACCACCTTATGTACCTGCTCTCTCTGCGGAGAGATCTTCCCCAAGATGGAAAGCCTGGACCTTCATCAAGCTATTCGCCATGCCGTGTCGGAGCTGGGTCCGGAAGATTCGGGTCGAAACATTGTGGAGATCATTTTCAAATCGAGCTGGCTCAAAAAGGATAGTCCCCTCTGCAAGATCGAACGGATATTAAAAGTACAGAATACCCAACGTACCATCCAACGATTCGAGGACTGCCGAGACGCAGTCAAGAGACTTGCTCTCAACACCACCAAAAAGAATCCCAGGTGCGCAGCCGATGGCAACGAGCTCTTGCGGTTCCACTGCACGAGCATAACCTGCGCGCTGGGTGCACGTGGCTCATCCAGCTTGTGCGGCTCCGTACCTGGCTGCGGCGTTTGCACAATCATCAGACACGGATTTCAGGGAAACTCGGGTGGTGGAGGTGACGGTGGTGACAACTGCAAGGGAGTGCGTACCACAGCTAGCAGCGGTAGGGCCCATGACTCGCTGCAACGCGCTGACAGTAGAAGAGCAATGCTGGTGTGCCGTGTGATTGCCGGGAGGGTGAAGCGCGTGGCTGACGAGGCACCGTCTGAGGAGGAAACTGTGTCGGCCGGCTCCTATGATTCCGTAGCCGGGTACGCCGGAATCTACTCGAATCTCGAAGAGTTGACAGTGTTCAATCCAAGGGCTATTCTTCCTTGTTTTGTTGTGATTTACAAAGTTCTTCCTTGTTG 1193 0.5339 MARLTFLSEPKEQESNSKRKRKQKPPSSWDQIKNLLPCKQIQGSRVYDPSKNGPIVAAHSKLGSSCSSICSFRDVVRGNTRVVHRVDNSSPENSTVGQETWLPSRKPLTGSSGSGKSHGGTTSSRGMQFRKLSGCYECHTIVDPSRLPIPRTTLCTCSLCGEIFPKMESLDLHQAIRHAVSELGPEDSGRNIVEIIFKSSWLKKDSPLCKIERILKVQNTQRTIQRFEDCRDAVKRLALNTTKKNPRCAADGNELLRFHCTSITCALGARGSSSLCGSVPGCGVCTIIRHGFQGNSGGGGDGGDNCKGVRTTASSGRAHDSLQRADSRRAMLVCRVIAGRVKRVADEAPSEEETVSAGSYDSVAGYAGIYSNLEELTVFNPRAILPCFVVIYKVLPC 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01915 397 MobiDBLite consensus disorder prediction 12 27 - -
Bva06g01915 397 MobiDBLite consensus disorder prediction 1 30 - -
Bva06g01915 397 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 18 395 - -
Bva06g01915 397 Gene3D - 179 394 - -
Bva06g01915 397 SUPERFAMILY ADP-ribosylation 180 393 - -
Bva06g01915 397 ProSitePatterns Zinc finger C2H2 type domain signature. 155 178 IPR013087 -
Bva06g01915 397 MobiDBLite consensus disorder prediction 86 125 - -
Bva06g01915 397 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 18 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01915 Bva-Chr6 13015139 13017581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01915 1 395 C2H2 Transcription Factor Family AT1G75710 61.555 2.57e-171 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01915 - - gmx:100816726 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01915 06 13015139 13017581 Bva06g01915 06 13015139 13017581 ECH