Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01888 ATGTTTCTCTTTATGCATCCcaagtgtttttcttcttcaatgtgTAAAAGCTTCTTGCTCAGTTTCGCACTGTTATTACTTGCTTCCTGTAAAACGAAGGCTGTGCTTAAACTGCCAGAAAACATCTCAGTTCCAGCAGTTTTAGTGTTTGGAGATTCAATCATGGATACaggcaacaacaacaacatgaAAACATTGGCCAAGTGCAATTTCCCTCCTTATGGCCAAGATTTTGAGGGAGGGATTCCAACGGGCCGATTTAGCAATGGCAAGGTTCCATCAGATCTCATAGCTGAAGAATTAGGCATTAAAGAGCTTCTACCAGCATATTTGGATCCAAATCTGCAACCTGGTGATTTGGCCACAGGTGTCTGCTTTGCATCTGGTGCCTCCGGATATGATCCTCTCACTTCCCAACTAGGGCCAGCTATATCCTTGTCTGCTCAAATAGACTTGTTCAAAGAATACATAGGGAAGCTGAAAGCAACTGTTGGAGAGCAGAGAACAAACTTTATATTAGCCAACAGTATTTTTGTTGTGGTTCAAGGCAGCAATGACATTTCCAACACATATTTTTTGAGTCACTTAAGAGAAGTCCAATATGATTTTCCTGCTTACAATGATCTTATAGTCACTTCGGCCTCTAATTTCTTGAAGGAAATATATCAATTAGGGGCAAGGAGGATAGCAGTAATGGGTGCACCACCACTAGGGTGTGTGCCATTTCAGAGAACTCTGCTCGGAGGAGTTGTGAGAGAGTGTGCGAAGAAGTACAACGATGCAGCAAAGTTATTTAACAGCAAATTGTCAAAGGAGATGAGTTCCCTTAAACAGAATTTGCCCAATTACAGCATTGCTTACGTAGATATTTACTACCCTCTACTTGATATCATAGAAAACTATCAGAATtatgGATATAAAGTGGCGGACAGAGGTTGCTGTGGCACCGGCAAAGTAGAAGCTGCAATACTCTGCAACCATTTGGATCCCACGTGTCCCAATGCTAGGGATTATGTCTTTTGGGATAGTTTTCATCCCACAGAAGGAGTATACAGAAAGCTTGTAGGTCAAATCCTTGGAAAATATTTGCGCCAACTCGTtggtcttaatta 1112 0.3966 MFLFMHPKCFSSSMCKSFLLSFALLLLASCKTKAVLKLPENISVPAVLVFGDSIMDTGNNNNMKTLAKCNFPPYGQDFEGGIPTGRFSNGKVPSDLIAEELGIKELLPAYLDPNLQPGDLATGVCFASGASGYDPLTSQLGPAISLSAQIDLFKEYIGKLKATVGEQRTNFILANSIFVVVQGSNDISNTYFLSHLREVQYDFPAYNDLIVTSASNFLKEIYQLGARRIAVMGAPPLGCVPFQRTLLGGVVRECAKKYNDAAKLFNSKLSKEMSSLKQNLPNYSIAYVDIYYPLLDIIENYQNYGYKVADRGCCGTGKVEAAILCNHLDPTCPNARDYVFWDSFHPTEGVYRKLVGQILGKYLRQLVGLN 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01888 370 PANTHER GDSL ESTERASE/LIPASE EXL3 22 363 - -
Bva06g01888 370 Pfam GDSL-like Lipase/Acylhydrolase 47 354 IPR001087 GO:0016788
Bva06g01888 370 CDD SGNH_plant_lipase_like 45 362 IPR035669 -
Bva06g01888 370 SUPERFAMILY SGNH hydrolase 177 359 - -
Bva06g01888 370 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 22 363 - -
Bva06g01888 370 Gene3D SGNH hydrolase 36 363 IPR036514 -
Bva06g01888 370 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 47 58 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01888 Bva-Chr6 12895071 12897485 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01888 14 359 Pollen Coat Proteome AT1G75910 41.547 7.16e-82 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01888 - - gmx:100793604 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01888 06 12895071 12897485 Bva06g01888 06 12895071 12897485 ECH