Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01875 ATGGGAGTGGGACAGAAGAGTATTGATATGGAGGAGGGGACACTTGAGATCGGCATGGAATATAGAACTGTCTCTGGTGTTGCCGGTCCACTAGTTATTCTTGACAAGGTTAAGGGACCGACGTATCAGGAAATTGTTAATATTCGCTTGGGAGATGGAACAACCCGGCGTGGCCAAGTTTTAGAAGTAGATGGAGAGAAAGCTGTAGTGCAGgtTTTTGAAGGAACATCAGGAATTGACAATAAATTCACAACTGTGCAGTTCACAGGCGAGGTTCTGAAAACTCCCGTGTCATTGGATATGCTTGGTCGCATATTTAATGGCTCTCGAAAACCCATTGACAATGGTCCTCCAATTCTACCTGAAGCATACCTGGATATTTCAGGAAGCTCCATCAACCCTAGTGAGAGAACGTATCCAGAAGAGATGATACAGACTGGTATTTCTACAATTGATGTGATGAACTCCATTGCTCGTGGACAGAAGATTCCCCTATTTTCTGCTGCTGGTCTTCCTCATAATGAAATTGCTGCACAGATTTGTCGTCAAGCTGGTCTAGTAAAGCGATTGGAAAAGTCTGAAAGTCTCGTTGATGGTGGGGAAGAGGACAATTTTGCCATCGTATTTGCAGCTATGGGTGTGAACATGGAGACAGCCCAGTTCTTCAAGCGTGATTTTGAGGAGAATGGATCAATGGAAAGAGTGACCCTATTCCTGAATCTGGCCAATGATCCCACCATCGAACGGATTATTACTCCTCGAATTGCCCTTACAACTGCAGAGTACTTGGCCTATGAATGTGGCAAACATGTTCTGGTTATATTGACAGATATGAGTTCTTATGCAGATGCCCTTCGTGAGGTCTCTGCTGCCCGAGAGGAAGTTCCTGGAAGGCGTGGATACCCTGGTTATATGTACACTGATCTTGCAACAATTTATGGGCGGGCAGGACGTATTGAAGGGCGAAAAGGTTCCATCACACAGATCCCAATATTAACCATGCCTAATGATGGTTA 1016 0.4478 MRRLEEYRTVSGVAGPLVILDKVKGPTYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSRKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSESLVDGGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYGRAGRIEGRKGSITQIPILTMPNDG 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01875 324 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 133 323 IPR000194 GO:0005524
Bva06g01875 324 CDD ATP-synt_V_A-type_beta_N 6 77 - -
Bva06g01875 324 CDD V_A-ATPase_B 78 323 - -
Bva06g01875 324 Pfam ATP synthase alpha/beta family, beta-barrel domain 10 76 IPR004100 GO:0046034|GO:1902600
Bva06g01875 324 PANTHER V-TYPE PROTON ATPASE SUBUNIT B1-RELATED 6 323 - -
Bva06g01875 324 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 323 IPR027417 -
Bva06g01875 324 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 6 323 IPR022879 -
Bva06g01875 324 Gene3D - 15 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01875 Bva-Chr6 12829949 12833933 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01875 6 323 Primary Pumps ATPases(2) AT4G38510 96.226 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01875 K02147 - ini:109159216 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01875 06 12829949 12833933 Bva06g01875 06 12829949 12833933 ECH