Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01865 ATGGGAGATAAATCGGGGACCGTAGTCTATCTTCACGGCGACCTCGATTTGAAAATTCTCGAGGCTCGGTGTTTGCCTAACATGGATTTGCTTACGGAGCGTGTCCGCAAGTTCTTCAGCGCTTTGAACAGTGTCTGTAGTGCTCCACTCTCCGgtagaaaaaagaagcataatCGTCACCGGAAAATCATCACCAGCGATCCATACGTCACCGTTTGCCTCGCCGGAGCTACGGTGGCTCGTACTCGTGTTATCTCCAACTCACAGAATCCAACTTGGAATGAGCGTTTCAAGATTCCCCTGGCCCATCCTGTCTCGCAGGTCGAGTTCTACGTCAAGGACAATGACGTATTTGGCGCTGATTTGATTGGAGTCGCCACCGTTTCTGCTGAGAGAATCTTATCAGGTGAAGTTATTTGTAATTGGTTCCCGATAATTGGTTCTTTTGGGAAACCACCCAAACCTGACTGTGCCGTTCGTCTTGAGATGAGATTCACCAAATGCGAGGATAATCCTATATACCGCTATGGAATTGCAGCCGATCCAGATCATTTCGGTGTGCACAACTGTTACTTTCCGGTGCGCCGTGGAGGATCTGTAACGCTTTACCAGGACGCCCACGTTCATGATTCTATGTTGCCGGAGATTGAATTGGATAGTGGAAATGTGTTTCAGCACGGCAAGTGTTGGGAGGATATATGTCATGCAATTCTGGAAGCACATCATTTGGTTTACATTGTAGGTTGGTCCATCTACCACAAGGTAAGGCTGGTCAGAGAACCGACGAGGCCATTACCCAACGGTGGGAATTTGAATTTGGGGGATTTGCTCAAGTACAAGTCACAAGAAGGTGTTCGAGTTCTACTGTTGGTTTGGGATGATAAGACTTCTCACAGCAAATTTTTCATCAATACgGCTGGAGTGATGCAGACTCATGATGAAGAAACTAGAAAGTTTTTCAAGCACTCTTCTGTTACGTGTGTGCTGTCCCCTCGATATGCCAGCAGTAAGCTTAGCATTATCAAGCAGCAGGTCGTTGGAACCCTCTTTACGCATCATCAGAAATGTGTCATTGTGGACACTCAAGCACATGGCAATAACCGGAAGATAACTACATTTATAGGTGGTCTGGACCTTTGTGATGGCCGCTATGACACACCCGAGCATAGACTTTTTCATGATCTTGACACTGTTTACAAGGGTGATTATCACAATCCCACATTCTCGGCAGGAATCAAAGGTCCAAGGCAACCGTGGCATGATCTACATTGCAAAATTGAGGGGCCTGCTGCATATGATGTACTTACTAATTTTGAGCAGCGGTGGAGAAAAGCTACCAAATGGCACGAGTTGggtcaaaaattcaaaagggtGTCTCACTGGCATGAAGATTCATTGATAAAGCTAGAACGTATCTCTTGGATTCTTAGTCCTTCTTCATCAATCCGGAATGATGATCCAGAATTGTGGGTTTCAAATGAAGATGATCCTGAAAACTGGCATGTTCAGGTTTTCCGATCCATAGATTCGGGTTCTGTAAAAGGATTTCCCAAGAATGTTTATGACTCCGAGGCTGAGAACCTTGTTTGTGCAAAGAATTTGGTCATCGAGAAGAGTATTCAAACAGCATACATACAGGCGATCAGATCCGCTcaacattttatttacattgagAATCAATATTTCCTTGGATCATCTTTCGCGTGGCCATCTTACAAAGAAGCAGGTGCagataatttaattcctatggaGTTGGCACTAAAGATTGTCAGTAAGATTAGAGCAAAGGAAAGGTTTGCAGTTTATGTAGTCATACCAATGTGGCCTGAAGGTATTCCTTCTTCTGCCTCGGTGCAAGAGATTCTCTTTTGGCAGGGGCAAACTATGAAAATGATGTATCGAGTCATAGCACAGGAGTTAAAATCTATGCACCTTGACAATTGCCATCCACAAGATTACCTCAATTTCTATTGTCTTGGAAACCGAGAGAAGTTGCCAAATGGAGTTTCAAATTCGAGTAGTTCTCCTTCAAGAAATGGTGAAACGATTTCGGCCTCGCAAAGGTTCCAGCGGTTTATGATTTATGTACATGCCAAGGGAATGATAGTGGATGATGAGTATGTGATTCTTGGATCTGCTAATATCAATCAACGTTCCTTGGCTGGTTCAAGAGATACCGAGATAGCAATGGGTGCATATCAACCTCAACATACATGGGGAAAGAAAAGGGGACATCCGCGTGGTCAGGTATATGGATATAGAATGTCTCTATGGATGGAACACTTGGGGATCCCTGATGATTGCTTCAAGGAGCCTGGAAGTTTAGATTGCGTGAAGCGTGTGAATGAGATTGCAGAAGATAACTGGAACAATTACACAGCTGAGGAGTTTATACCATTGCAGGGGCACCTCCTAAAATACCCTGTCCATGTTAATGCCGATGGGAAGGTAAGTCCCTTGCCTGGATTTGAGTCCTTTCCAGATGTGGGGGGCAAGGTACTCGGCTGCCGGACTTCTCTTCCTGATGCTCTGACTACCTA 2540 0.4378 MGDKSGTVVYLHGDLDLKILEARCLPNMDLLTERVRKFFSALNSVCSAPLSGRKKKHNRHRKIITSDPYVTVCLAGATVARTRVISNSQNPTWNERFKIPLAHPVSQVEFYVKDNDVFGADLIGVATVSAERILSGEVICNWFPIIGSFGKPPKPDCAVRLEMRFTKCEDNPIYRYGIAADPDHFGVHNCYFPVRRGGSVTLYQDAHVHDSMLPEIELDSGNVFQHGKCWEDICHAILEAHHLVYIVGWSIYHKVRLVREPTRPLPNGGNLNLGDLLKYKSQEGVRVLLLVWDDKTSHSKFFINTAGVMQTHDEETRKFFKHSSVTCVLSPRYASSKLSIIKQQVVGTLFTHHQKCVIVDTQAHGNNRKITTFIGGLDLCDGRYDTPEHRLFHDLDTVYKGDYHNPTFSAGIKGPRQPWHDLHCKIEGPAAYDVLTNFEQRWRKATKWHELGQKFKRVSHWHEDSLIKLERISWILSPSSSIRNDDPELWVSNEDDPENWHVQVFRSIDSGSVKGFPKNVYDSEAENLVCAKNLVIEKSIQTAYIQAIRSAQHFIYIENQYFLGSSFAWPSYKEAGADNLIPMELALKIVSKIRAKERFAVYVVIPMWPEGIPSSASVQEILFWQGQTMKMMYRVIAQELKSMHLDNCHPQDYLNFYCLGNREKLPNGVSNSSSSPSRNGETISASQRFQRFMIYVHAKGMIVDDEYVILGSANINQRSLAGSRDTEIAMGAYQPQHTWGKKRGHPRGQVYGYRMSLWMEHLGIPDDCFKEPGSLDCVKRVNEIAEDNWNNYTAEEFIPLQGHLLKYPVHVNADGKVSPLPGFESFPDVGGKVLGCRTSLPDALTT 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01865 846 Gene3D Endonuclease Chain A 220 468 - -
Bva06g01865 846 ProSiteProfiles C2 domain profile. 1 143 IPR000008 -
Bva06g01865 846 PANTHER PHOSPHOLIPASE D 6 845 - -
Bva06g01865 846 PIRSF PLD_plant 1 846 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bva06g01865 846 SUPERFAMILY Phospholipase D/nuclease 491 777 - -
Bva06g01865 846 SUPERFAMILY Phospholipase D/nuclease 190 454 - -
Bva06g01865 846 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 11 166 IPR035892 -
Bva06g01865 846 CDD C2_plant_PLD 8 166 - -
Bva06g01865 846 Pfam PLD-like domain 545 728 IPR025202 -
Bva06g01865 846 Pfam C2 domain 13 145 IPR000008 -
Bva06g01865 846 Gene3D C2 domain 8 165 IPR035892 -
Bva06g01865 846 Pfam Phospholipase D C terminal 766 836 IPR024632 -
Bva06g01865 846 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 348 383 IPR001736 GO:0003824
Bva06g01865 846 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 692 719 IPR001736 GO:0003824
Bva06g01865 846 PANTHER PHOSPHOLIPASE D 6 845 IPR015679 -
Bva06g01865 846 Gene3D Endonuclease Chain A 511 738 - -
Bva06g01865 846 SMART pld_4 348 383 IPR001736 GO:0003824
Bva06g01865 846 SMART pld_4 692 719 IPR001736 GO:0003824
Bva06g01865 846 Pfam Phospholipase D Active site motif 349 383 IPR001736 GO:0003824
Bva06g01865 846 SMART C2_3c 14 142 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01865 Bva-Chr6 12784678 12790674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01865 1 683 Phospholipase D Gene Family (Wang group) AT4G35790 65.861 0.0 960
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01865 K01115 - jre:108981014 1452.57