Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01858 ATGGCTGACCAATGCTCGAATGAAGGTCCCAGTACCACCAATGTTTCTGCAGAATCTTCAGATTCAACTGTTCAGCTCAATATCAAGACTTTAGATTCCAGGATTTACAGTTTTCAAGTGGATAAAAATATGCCAGTCTCATTTTTCAAGGAGAAAATAGCGAATGAAATTGGTGTTCCAGTTGGTCAGCAACGGTTGATTTTCAGGGGAAAAGTCTTAAAGGATGATCATGTTATTTCAGAATATCACGTTGAGAATGGGCATACGTTGCATTTAGTTGAAAGGCAACCAAATCAGTTGCAAGGCACTAGCTCTAGTGAGACAAGTGGTACTAATGGTAATCGAgGCAACGGTGCAAGCTCTGGGGCTCCGCGTAATCGTGCTGGGCAAATTTCACACAGTGTTGTTCTTGGGACCTTTAATGTTGGGGAGCAAGGTGAAAGCATTGCTCCGGAACTTACTCGGGTTATTGGGGCAGTTTTGAGTTCTATTGGAATTGGTGGCCAGAGCACAAATAGTATTGCTACTGCTATGCAGCCTTCTTCTTCAGCTCCTTCAGGGAATGAAGCAGGAAATCAAGCACAGTCTGGACAGACATTTCCTAGTTCATTCCAATCTTTGCCTCAAGTTGCTCGGATTCCTCTGGCTTCTGGAGCAATACCTGTTCCTTCATTCAATGCTCCAATTCCTGACTCATTACACACCCTGACTGAATTTATAAACCGCACAGAGCGAGCACTATCACAAAATGGCTACTTACCAAATTTGTCTTCAAATGACATTGGAGAGCAACCACAAGTGGAGTTACATTCCAATATGCAAGGGTTGCCTACACCTGAAGCATTAAGCATTGTCTTGCGTCATACAGAAAGGCTGCTCAGTGGTCATGCTGTTGCCGCACTATCTCATTTTGCAGGACGCTTGGAGAGAGAGGGGACAACTTCTGATCCAGGTATAAGGGGCCAAATACAGTCAGAGGCAGTACAAATAGGACTTATTATGCAGCATTTGGGTGCACTTCTACTTGAGCTTGGCCGTATAATTTTGACATTGCGAATGGGACAGTCTGCAGCAGAATCTGTTGTTAATGCCGGGCCAGCAGTTTATATTTCTCCATCAGGACCTAATCCTATAATGGTGCAGCCTTTTCCACTTCAGACTAGTTCCCTGTTTGGTGGTTCTGTTTCTCCTTCAACTGCTGCGACATTTGGTCCCATTGGTGGTGGAGGTGCCCCTAGGAACATAAACATCCATATACATGCTGGAACCAGGCCAACTAATGGGGAAGGGGCACAAAATGAACACCCTAATGGTCCTGGATCTAGTGATTCAGGGTCAACAAGGGTATTACCTGTAAGAAATGTCATTGCTTCAGCTGTGCCATCACAGCTTCCTGGTATTGCAGTGGCCAGTGGCTCACAATCTGGTGTTGGTGTTTCTACTTCACAGCCTCCTGATTCAGTTTCATTACAATCCGTTTTAGCTGAGGTCAATTCCCGCATTAGAAACTTGGTTGGGAATCTGCAAGGAGATAACACAGTTCTGTCAGGTGGAGTGGAGTCAACTAGGCAGGACTTCTCTGTTAGTGCTGAATCCCGACCTACTTCTGGGAATGAACAGCTAGATACCGTGGATATGAATGGTATTGGAGGTGCCCCTGTGTCTTCAGTTAGACTCGCCTCTGAAAGTAGGGTAGATGAGCCCCAACTTGAGGCAGTTCAAATCTGTAATGATGGAGATAGAGATGCTTCGAGCAACAATTTTGTTTCTGCTTCTGACGGATATTTTGTAAGTAGTTCGAGTGGAGAAACAATATCAAGGTCAGAAAATGTACAAGAAATTACTTCACCTGTAGGGGAGAGACAAGACCTAGATGAAGGTGCCAAAGCTGCTCCACTTGGATTGGGTGTGGCTGGCTTAGAACGTAAGAGACGACCTAGAGCTCTTCCTTCTGTTGGTAAAGGTGCTAATGGTGGTTCAAGAAGTTCTGTTGATCAACATCAACATGCTAGAATAGGTGGTCAGCATATATTGCAAGCTCTTGCAAGTCATGGATCTGTAGTGAATCAGAGAAATTCTGATGGACCATCCCAAGGATCCTCTGCCTCTGGTAATGGCCAGGTTGATGTGGCTGGTGTTATGTCTCAAGTTTTGCATAGCCCTGCTCTGGATGGTTTGTTGACCGGAGTTTCGCAGCAAACTGGAGTTGGCTCACCTGATGTCGTAAGGAATATCTTGCAGCAGATCACACAGAGCCCACAGAGGGATACAGTTAATAACATTGTCCAGCAGGTTGGCAGTCAGGATGTGGGAAATATTTTCGCTGGAATTGATAGAAGGCAAGGTGGTGGGATTGACTTGTCAAGGATGTTTGGGCATATGATGCCCATTGTATCTCAAGCTCTCGGCAGTATAACCCCTTCTCAGTCATTTTCTGCTGCAGAACCAGAGTCACAGGCACCGTACAGAGATGGTAGATTGAGCAGAGTTGATAATTCTAATAATCAAAGCTTACAGATAAACCTTCAACCAGTGGCAGAGACGATTGAGGGCCCAAGTCCCCCTGATGTTGTTTTCCGTGCCGTGGCTGAAAATGCTGTGCAGCTGTCTGGCAGCGGAAGTGCTTCTAATGCTCTTCTGGAAGAGTTATGCTGCGATGACGGTCTTGCCAGTGTGAGTATTCTCCGATTATTATATTTGCTCTCTTA 2708 0.4531 MADQCSNEGPSTTNVSAESSDSTVQLNIKTLDSRIYSFQVDKNMPVSFFKEKIANEIGVPVGQQRLIFRGKVLKDDHVISEYHVENGHTLHLVERQPNQLQGTSSSETSGTNGNRGNGASSGAPRNRAGQISHSVVLGTFNVGEQGESIAPELTRVIGAVLSSIGIGGQSTNSIATAMQPSSSAPSGNEAGNQAQSGQTFPSSFQSLPQVARIPLASGAIPVPSFNAPIPDSLHTLTEFINRTERALSQNGYLPNLSSNDIGEQPQVELHSNMQGLPTPEALSIVLRHTERLLSGHAVAALSHFAGRLEREGTTSDPGIRGQIQSEAVQIGLIMQHLGALLLELGRIILTLRMGQSAAESVVNAGPAVYISPSGPNPIMVQPFPLQTSSLFGGSVSPSTAATFGPIGGGGAPRNINIHIHAGTRPTNGEGAQNEHPNGPGSSDSGSTRVLPVRNVIASAVPSQLPGIAVASGSQSGVGVSTSQPPDSVSLQSVLAEVNSRIRNLVGNLQGDNTVLSGGVESTRQDFSVSAESRPTSGNEQLDTVDMNGIGGAPVSSVRLASESRVDEPQLEAVQICNDGDRDASSNNFVSASDGYFVSSSSGETISRSENVQEITSPVGERQDLDEGAKAAPLGLGVAGLERKRRPRALPSVGKGANGGSRSSVDQHQHARIGGQHILQALASHGSVVNQRNSDGPSQGSSASGNGQVDVAGVMSQVLHSPALDGLLTGVSQQTGVGSPDVVRNILQQITQSPQRDTVNNIVQQVGSQDVGNIFAGIDRRQGGGIDLSRMFGHMMPIVSQALGSITPSQSFSAAEPESQAPYRDGRLSRVDNSNNQSLQINLQPVAETIEGPSPPDVVFRAVAENAVQLSGSGSASNALLEELCCDDGLASVSILRLLYLLS 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01858 902 SUPERFAMILY Ubiquitin-like 14 98 IPR029071 -
Bva06g01858 902 MobiDBLite consensus disorder prediction 422 448 - -
Bva06g01858 902 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 6 891 - -
Bva06g01858 902 MobiDBLite consensus disorder prediction 600 668 - -
Bva06g01858 902 MobiDBLite consensus disorder prediction 687 707 - -
Bva06g01858 902 CDD Ubl_ubiquitin_like 26 93 - -
Bva06g01858 902 SMART ubq_7 24 95 IPR000626 GO:0005515
Bva06g01858 902 PANTHER OS07G0498800 PROTEIN 6 891 - -
Bva06g01858 902 MobiDBLite consensus disorder prediction 426 448 - -
Bva06g01858 902 MobiDBLite consensus disorder prediction 92 127 - -
Bva06g01858 902 MobiDBLite consensus disorder prediction 89 127 - -
Bva06g01858 902 ProSiteProfiles Ubiquitin domain profile. 24 99 IPR000626 GO:0005515
Bva06g01858 902 MobiDBLite consensus disorder prediction 1 22 - -
Bva06g01858 902 MobiDBLite consensus disorder prediction 172 202 - -
Bva06g01858 902 Gene3D - 12 109 - -
Bva06g01858 902 MobiDBLite consensus disorder prediction 600 617 - -
Bva06g01858 902 MobiDBLite consensus disorder prediction 515 541 - -
Bva06g01858 902 Pfam Ubiquitin family 26 96 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01858 Bva-Chr6 12738204 12746583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01858 24 95 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 37.500 1.12e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01858 - - gmx:100811870 1068.53