Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01857 atggaaaagaaattgttaaGCAAAAGTGAAGAGGGACCTATTCGATGTAAAGCGGCGGTGTGTCACAAACCAGGTGAGCCACTCGTCATTGAGGAGATCGTGGTAGCGCCGCCAATGCCACGAGAGGCCCGGATTCGTGTTATTTGCACGTCTCTTTGTCACAGCGATATTACTTTTTGGAAGATGAAGGACCCTCCTGCAATTTTCCCAAGAATCTTGGGCCACGAAGCAATTGGGGTTGTGGAAAGCACAGGGGAGGATGTAACTGAAGTGAATAAAGGAGATATGGTTATCCCTATTTTCTTACCTGATTGTGGTGAGTGTTTCGACTGCAAATCAAACAAGAGCAACCTTTGCACAAAGTTCCCTTTCAGAATATCTCCTTGGATGCCTAGGCTTGCCACAAGCAGATTCACCAATCTAGAAGGAGAGGtcatatatcattttctttccgtGTCAAGTTTTAGTGAGTACACTGTGGTTGATGTTGCCAATCTAACAAAGATCGATCCCGTAATTCCTCCCAACAGGGCATGCCTCCTCAGTTGTGGTGTATCAACTGGGGTAGGTGCTGCTTGGAGAACGGCAAATGTGGAAGCAGGTTCTACGGTTGCCATTTTTGGTTTGGGCTCTATAGGATTAGCAGTTGCTGAGGGAGCTAGACTTTGTGGAGCAAGTAGGATTATAGGTGTGGATGTCAACccagaaaaatttgaaattgGGAAAAAATTTGGACTGACAGATTTTGTCCACGCTGGAGTATGTCAGAACAAATCTGTGAGCCAGGTTATCATTGAGATGACTGGTACGGGAGCAGATTATTGCTTTGAGTGTGTTGGAATGGCATCATTGGTTCATGAAGCATATGCTTCTTGTCGAAAgGGTTGGGGAAAAACAATAGTCATGGGAGTTGACAAGCCAGGGTCCATGTTGAACCTAAGCTCCTTTGAGGTTCTTCATACTGGGAAAACTCTCATGGGATCCTTATTTGGAGGACTGAAACCGAAATCTGATATTCCCATTCTCATTAAACGTTATATGGACAAGGAACTGCAATTGGATGAGTTTGTCACGCATGAGGTGAAGTTTAAGGATATCAATAAAGCTTTTGATTTGCTGATTGAAGGAAAGAGTCTTCGATGTGTGATTTGGATGGACAATTG 1163 0.4248 MEKKLLSKSEEGPIRCKAAVCHKPGEPLVIEEIVVAPPMPREARIRVICTSLCHSDITFWKMKDPPAIFPRILGHEAIGVVESTGEDVTEVNKGDMVIPIFLPDCGECFDCKSNKSNLCTKFPFRISPWMPRLATSRFTNLEGEVIYHFLSVSSFSEYTVVDVANLTKIDPVIPPNRACLLSCGVSTGVGAAWRTANVEAGSTVAIFGLGSIGLAVAEGARLCGASRIIGVDVNPEKFEIGKKFGLTDFVHAGVCQNKSVSQVIIEMTGTGADYCFECVGMASLVHEAYASCRKGWGKTIVMGVDKPGSMLNLSSFEVLHTGKTLMGSLFGGLKPKSDIPILIKRYMDKELQLDEFVTHEVKFKDINKAFDLLIEGKSLRCVIWMDN 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01857 387 SUPERFAMILY GroES-like 335 384 IPR011032 -
Bva06g01857 387 Pfam Alcohol dehydrogenase GroES-like domain 41 168 IPR013154 -
Bva06g01857 387 SUPERFAMILY GroES-like 12 198 IPR011032 -
Bva06g01857 387 Pfam Zinc-binding dehydrogenase 212 335 IPR013149 -
Bva06g01857 387 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 173 348 IPR036291 -
Bva06g01857 387 Gene3D - 188 328 - -
Bva06g01857 387 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
Bva06g01857 387 Gene3D - 19 380 - -
Bva06g01857 387 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 11 384 - -
Bva06g01857 387 PANTHER ALCOHOL DEHYDROGENASE 11 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01857 Bva-Chr6 12733693 12736208 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01857 41 186 Monolignol Biosynthesis Gene Families AT4G37970 30.405 1.91e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01857 K00121 - gmx:100806887 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01857 06 12733693 12736208 Bva06g01857 06 12733693 12736208 ECH