Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01852 ATGGGCTGTTGCGAATCATCCCTTTCAAAAGGCTCTAATACCAAAAACAATCGTCATTACCAGAACAATGTCCCTGCTTCGTCCAACGGCGCTAATACCGGCGCTGCCACTCTTGCCGGACACGTACCGGTTTTCTCCGAGTTCTGTCTCGATGACCTTAAAGCCGCTACCAACAACTTCAGCCCTGATAACATCGTCTCCGAGAGCGGAGAAAAAGCTCCCAATGTCGTTTACAAAGGTCGCCTCCAGAACCAAGACCGTCGTTGGATTGCCGTTAAGAAATTTACCAAATTGGCCTGGCCCGACCCAAAGCAATTCGCTGATGAAGCTTGGGGAGTTGGGAAATTAAGACACCAAAGGCTTGCTAATTTGATTGGCTATTGCTGCGATGGCGATGAGAGACTTCTTGTTGCCGAGTACATGCCCAATGACACACTTGCTAAACATCTATTTCACTGGGAGAATCAGACAATCGAGTGGGCCATGCGGTTAAGAGTTGCCCTATCCATTGCTGAAGCATTAGATTATTGTAGCACTGAAGGCCGTCCGTTGTACCATGACTTGAATGCTTACAGAGTTCTCTTTGATGAGAATGGCGATCCTCGTCTCTCATGCTTTGGGTTGATGAAGAATAGTAGGGATGGGAAAAGTTATAGCACAAATCTTGCTTATACACCTCCTGAGTATCTAAGAAATGGGAGGGTGACTTCGGAAAGTGTCATCTTCAGCTTTGGGACTGTATTATTGGATCTTCTAAGTGGCAAGCATATCCCTCCTAGTCATGCTCTTGACATGATAAGGGGGAAAAATATCCTTCTCCTTATGGATTCCCATTTGGAAGGAAACTTTTCAACTGAAGAGGCAACTGTGGTTCTTGATCTTGCCTCACAGTGCTTGCAGTACGAACCTAGGGAGCGGCCCAAGACCAGGGATCTTGTTACAACACTTTCCCCATTACAAAACAAACTTGATGTTCCATCCCATGTAATGCTTGGAATTCCGAAGCATGAAGAAGCACCTCCTACTCCGCAGCATCCCCTTTCCCCAATGGGCGATGCTTGTTCTCGAATGGACCTTACGGCTATCCATCAGATTTTGGTGATGACGCACTACAGAGACGACGAAGGGACTAATGAGTTGTCGTTCCAAGAATGGACCCAGCAAATGAGAGATATGTTGGAGGCAAGAAAGCGTGGTGATTTGGCGTTCCGTGACAAGGATTTTAAAACAGCAATTGACTGTTATTCCCAGTTTATTGACGTCGGAACCATGGTCTCCCCAACTGTCTATGCACGGAGAAGTCTGTGCCATCTCCTCTGCGATCAACCAGATGCTGCTCTGCGAGATGCAATGCAAGCACAGTGCGTCTATCCTGATTGGTCCACAGCATTTTATATGCAGGCAGTAGCTCTTTCCAAATTAAACATGCATAAAGATGCAACTGACATGCTAAATGAGGCTGCTGCTCTAGAAGAGAAAAGGCAACGGGGTGGTAGAGGTTCTTG 1505 0.4671 MGCCESSLSKGSNTKNNRHYQNNVPASSNGANTGAATLAGHVPVFSEFCLDDLKAATNNFSPDNIVSESGEKAPNVVYKGRLQNQDRRWIAVKKFTKLAWPDPKQFADEAWGVGKLRHQRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALSIAEALDYCSTEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTSESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILLLMDSHLEGNFSTEEATVVLDLASQCLQYEPRERPKTRDLVTTLSPLQNKLDVPSHVMLGIPKHEEAPPTPQHPLSPMGDACSRMDLTAIHQILVMTHYRDDEGTNELSFQEWTQQMRDMLEARKRGDLAFRDKDFKTAIDCYSQFIDVGTMVSPTVYARRSLCHLLCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALSKLNMHKDATDMLNEAAALEEKRQRGGRGS 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01852 501 Gene3D Phosphorylase Kinase; domain 1 37 140 - -
Bva06g01852 501 ProSiteProfiles Protein kinase domain profile. 63 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01852 501 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 499 IPR045845 GO:0004672|GO:0009742
Bva06g01852 501 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK11 1 499 - -
Bva06g01852 501 SUPERFAMILY TPR-like 395 492 IPR011990 GO:0005515
Bva06g01852 501 SUPERFAMILY Protein kinase-like (PK-like) 42 325 IPR011009 -
Bva06g01852 501 Gene3D Tetratricopeptide repeat domain 390 498 IPR011990 GO:0005515
Bva06g01852 501 Gene3D Transferase(Phosphotransferase) domain 1 142 333 - -
Bva06g01852 501 MobiDBLite consensus disorder prediction 1 29 - -
Bva06g01852 501 Pfam Protein tyrosine and serine/threonine kinase 76 316 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01852 Bva-Chr6 12712249 12716602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01852 48 343 Glycoside Hydrolase AT3G07070 33.437 3.97e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Bva06g01852 PK_Tyr_Ser-Thr 1.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01852 K14500 - tcc:18591677 903.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01852 06 12712249 12716602 Bva06g01852 06 12712249 12716602 ECH