Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01839 ATGATAGAAAAGAAGGAGGAGTTTCTCACTGTAGCGCCATTTGAGTGTGCCTGGCGAAAGGATTTGAAATTCCGAGAAGCAGGTCGGGGTTGTGTCTCTTTTGAAGCTTTCGCTCGCAATGATGTCACGCTGATTTTCCGGGAGAATGTGGGAAGCCGAAACTACCattataaaagagatagtAGTCCTCACTATACTGTCATATTGGGTAGTCATAGGAATCGACGACTGAGAATTGAGGTTGACGGAAAAACTGTCGTTGATGTAGCAGGCGTTGGGCTGTGTTGCTCTTCATCGTTTCAGAGTTATTGGATCAGTATCTATGATGGGCTAATCAGCATCGGTAAAGGGAAATACCCTTTTCAGGATATTGTCTTCCAGTGGATCGATTCTAATCCAAACTGTAATGTTCGGTATATTGGGCTAAGCAGCTGGGATAAACATGTTAGCTATAGAAATGTCAACGTGTTGTCGTTAACACACAATCACATGTCCCTGTGGAAGCATGTTGATTTTGGTGAATATCAAGTTGAAGAGGAGGGCGATGAGGAGTTGGGAGATGAACTGATGGATTATGATAACTGGGGGTTGAAACATTTTCTCGAGAGTTGGGAACTATCTGACATGTTATTTATCGTTGGCGTGGAAGAAAGACCTGTGCCTGCTCACAAGACAATTTTAGCAGCATCTGGGAATTTTCCTTTAAGCTCAACATCATATGTTATCTCCTTGCCTACAGTAACTTATCCAGTTCTCCATGCACTGCTTCAGTACATCTACACCGGCTGGACCCAGATTCCACAGGAACAACTCGGTTCCTTGAGGGCTGTAAGCCTACAGTTCGAAGTTATGCCATTAGTGAAGCAATGTGAAGAGACTATGGAACGGATTAAGCTAAACAGGAAGTTGTTTGAATCGGGCAACAATGTGGAGTTCTCATATCCAAGCACCCGGCCTCATTGTTGTACAACTTTGCCCTCACTTCCCATTGGAATTCAGAGACTGAAACAATTGCAATCAACTGGCGAGTACAGTGATGTAAACATCTGCATTGAAGGTTACGGCCTTGTTGCCCAAGTGCATAAAATTGTTCTCAGTTTATGGAGTATCCCTTTTGCCAAGATGTTCACCAATGGAATGAGTGAAAGCATTTCGTCGGAGGTTACCATAAGGGATGTGCCACCAGAAGCTTTCAGAGCAATGCTTGAGTTTATGTACAGTGGTGAACTAAGTGACGCAGTTAGTTTAGATTCCGGTGCTCTTTTACTTGAATTGCTTTTATTGGCTGACCAATTTGGAGTGACTCTTCTTCATCAAGAATGCTGCCAAATACTGTTAGAATGCCTTTCAGAGGACTCAATATGTCCACTCCTCCAAGTGGTTTCATGGATCCCATCATGTAGACTTATTAAAGAAACATGCCAGAGGAAATTTTCTATGAATTTTGACTATTGTACCACTACAAGTACCGTCTTCGTCTTGTTAGATGAGACAGTTTTCAGTAATATCGTTCAGAGGCCGGCGTATCCCATGATTACAAAAGCTTACAACTACAGCAGGGAAGTTCTCTGCAAGAGCCACACGAATTGGGGCAAACTGATGGATAGGAGGGCAAAAAGAAATGTTGGAATGTCATGTTTTAAATGTGAGTTAAAGAATAAACAGGGATTAAGTGAATTACTGCAACGCACTATGGACTGGACCTCAGTTGCTCgttttaaaattagaactCATCCGGATCTGGCAGTAACATCTGAAGAGAAAGTTCTTAATGCAATTCTAGTGTTTGGCTTGAAGGCAAAAGAATTATTTGGGTGGGAAGTATTGGACGAGTTGATGATAAATTCAAAACCTGAACTCCTGTTTGGCGATAGGCTTCAGTTAGTCAACGACTTGCTTTCCTTTGTGCGATTTCCACTGCTGCCATACTCCTTGCTTAAGAAGTTGCAGAATAGCAACATAAGTTGGCGCATTCCTGTTTTCCAAAATCTTGTTAATGAGGCcatcaattttattgaatttggaCATGGTAgaacagaaaatgaagaaaaTGTAAGATTCCAACATAGGCGGTCTAATTATAAGGAGTTTCAGTACATACGTGATGGGGATAGCAATGGAGTTTTGTACTTTGCTGGCACATCCTATGGCGAACATCAGTGGGTTAATCCTGTATTGGCAAAGACACTTACCATTACGGCTAGCAGTCCCCATTTGAGATACACTGATCCTAAGGTTTTGGTCTCAAGGACTTACCAGGGAACATCATATGCAGGTCCTCGAATGGAAAATGGACACAAGCGTGCCTGGTGGATGGTTGACCTCGGCCAAGATCATCAGCTTATGTGCAACTATTACACTGTGAGACAGGACGGATCCAGAGCCTTCATGAGATGTTGGAATTTTCAGGCTTCACTGGACGGGAAGACCTGGACGAACCTGAGAGTACATGAAAATGACCCGACAGTGTGTAGACCCGGTCAGTTTGCATCTTGGCCCATAATTGGGGCGAACGCTCTGCTTCCTTTTAGGTATTTTCGCCCTGTTCTTACTGGACCAACTACAGATGCCACTAATCCCTGGAACCTCTGCATTTGTTACTTGGAACTCTATGGCTACTTCCTCTA 2627 0.4233 MIEKKEEFLTVAPFECAWRKDLKFREAGRGCVSFEAFARNDVTLIFRENVGSRNYHYKRDSSPHYTVILGSHRNRRLRIEVDGKTVVDVAGVGLCCSSSFQSYWISIYDGLISIGKGKYPFQDIVFQWIDSNPNCNVRYIGLSSWDKHVSYRNVNVLSLTHNHMSLWKHVDFGEYQVEEEGDEELGDELMDYDNWGLKHFLESWELSDMLFIVGVEERPVPAHKTILAASGNFPLSSTSYVISLPTVTYPVLHALLQYIYTGWTQIPQEQLGSLRAVSLQFEVMPLVKQCEETMERIKLNRKLFESGNNVEFSYPSTRPHCCTTLPSLPIGIQRLKQLQSTGEYSDVNICIEGYGLVAQVHKIVLSLWSIPFAKMFTNGMSESISSEVTIRDVPPEAFRAMLEFMYSGELSDAVSLDSGALLLELLLLADQFGVTLLHQECCQILLECLSEDSICPLLQVVSWIPSCRLIKETCQRKFSMNFDYCTTTSTVFVLLDETVFSNIVQHPDLAVTSEEKVLNAILVFGLKAKELFGWEVLDELMINSKPELLFGDRLQLVNDLLSFVRFPLLPYSLLKKLQNSNISWRIPVFQNLVNEAINFIEFGHGRTENEENVRFQHRRSNYKEFQYIRDGDSNGVLYFAGTSYGEHQWVNPVLAKTLTITASSPHLRYTDPKVLVSRTYQGTSYAGPRMENGHKRAWWMVDLGQDHQLMCNYYTVRQDGSRAFMRCWNFQASLDGKTWTNLRVHENDPTVCRPGQFASWPIIGANALLPFRYFRPVLTGPTTDATNPWNLCICYLELYGYFL 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01839 803 Pfam Farnesoic acid 0-methyl transferase 53 149 IPR022041 -
Bva06g01839 803 Pfam BTB/POZ domain 197 295 IPR000210 GO:0005515
Bva06g01839 803 Pfam BTB/POZ domain 335 447 IPR000210 GO:0005515
Bva06g01839 803 PANTHER OS05G0345500 PROTEIN 1 802 - -
Bva06g01839 803 SMART BTB_4 207 298 IPR000210 GO:0005515
Bva06g01839 803 SMART BTB_4 345 449 IPR000210 GO:0005515
Bva06g01839 803 Pfam F5/8 type C domain 660 749 IPR000421 -
Bva06g01839 803 Gene3D - 479 600 - -
Bva06g01839 803 ProSiteProfiles BTB domain profile. 345 414 IPR000210 GO:0005515
Bva06g01839 803 CDD BTB_POZ_ZBTB_KLHL-like 344 411 - -
Bva06g01839 803 Gene3D Potassium Channel Kv1.1; Chain A 331 478 IPR011333 -
Bva06g01839 803 Gene3D - 678 802 - -
Bva06g01839 803 CDD BTB_POZ_ZBTB_KLHL-like 206 281 - -
Bva06g01839 803 SUPERFAMILY POZ domain 197 295 IPR011333 -
Bva06g01839 803 Gene3D Potassium Channel Kv1.1; Chain A 195 310 IPR011333 -
Bva06g01839 803 SUPERFAMILY POZ domain 333 446 IPR011333 -
Bva06g01839 803 SMART BACK_2 455 578 IPR011705 -
Bva06g01839 803 ProSiteProfiles BTB domain profile. 207 268 IPR000210 GO:0005515
Bva06g01839 803 SUPERFAMILY Galactose-binding domain-like 646 802 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01839 Bva-Chr6 12654611 12660546 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Bva06g01839 F5_F8_type_C 1.5e-09 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01839 - - jre:109002934 1286.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01839 06 12654611 12660546 Bva06g01839 06 12654611 12660546 ECH