Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01836 ATGGGAGATGGCGCTATGTTGCCTGGTACCTTGCTGGAAGCTCCACCTGAGTCGTCCCTGGATTTTGACTACATGGATGAACTTTTCTTAGATGGATGCTGGTTGGAGACAACAATAGAGGGATCTGATTTCCTGCTGCAGAGTCCTTCTACTTGTAATCTCCTATTTGAcccttcattttcattttcatggcCTGTCTTGGAAACTAATGGGGTTTTGAGCGTAAGCTCGTCTCACTCTGGAAATCATGAAGAAAGGCAAAGACCCTTGGTTAATGAATCCCAGGAAACTCCTCTCGATGCTCAACTGCTTAGCCAAGACATGATCAATATTGAAGGAAGTTGTAGTCAGTCTGAATTTCATTCGGCTCAAGGTTCTGAAGTGGTCAGAAGGTGGTGTAATCAACCCACACCCATGTTTAATCCAGCTCCAGCTTCTTCTGTAATGGAAAGACTAGTTAGGGCACTTGTGTATATCAAAGATCTCAGTAGAGACAAAGATGTGCTTGTACAAATGTGGGTGCCAGTTTGTAGAGGGGGTAGGCAGATTCTAACAACTAATGACCTTCCTTTCTCACTAGGAAGCACCCATCTAAATCTTGCAAAATACAGAGAAATCTCTGAGAAGTATCAGTTTTCAGCTGAAAATGACTCCAAGGGGTTGTTGGCAGGATTGCCAGGTCGAGTTTTTGGGGGGAAGGTTCCTGAGTGGACTCCCGATGTTCGATTTTTCAGAAGTGATGAATACCCAAGAGTTGACCATGCTCAAGAGTACGATGTGCGTGGAACTTTAGCTCTCCCTGTCTTTGAGCAAGGTAGCAGGAGTTGCTTGGGTGTTATTGAGGTTGTCATGACTACCCGGCAGATCAAGTATCGCTGCCAACTTGAAAGTGTTTGCAAAGCACTTGAGGCTGTTGATCTTAGAAGTTCTGAAATTTCAAGTATTCAGAATGTGAAGGAGGCATGCAACAAGTCCTATGAAGCTGCATTACCCGAGATCCAGGAGGTGTTTAGATCTGCATGTGAAATGCACAAATTACCTTTAGTTCAAACTTGGGTTCCATGCATCCAACAAAGCAAAGACGGTTGCCGGCATTcaaatgataattatttacattGTATTTCTCCCGTGGATAATGCTTGCTACGTTGGTGATCCCAGTGTACAGGCTTTTCACGAGGCTTGCTCTGAGCATCACTTGTTGAAAGGGCAAGGCGTTGTCGGAGGAGCTTTTATGACAAATCAACCATGCTTCTCAACTGACATAACCGCCATGGGCAAGACAGAGTATCCGCTGTCTCACCATGCAAGGATGTTCAGATTGCGGGCTGCTGTTGCTGTACGATTGCGAAGCATCCATTGTAGTAGAGATGATTTCGTCCTGGAGTTTTTCTTGCCCCCAGACTGCATTGACGATGAAGAACAGAAGAAGATGCTTACTTCATTGTCCATGATTATACAACGGGTTTGCTGTAGCTTACGGGTCATAAGCAATGACGAAttagaggaggaggaggagactAGGTTATCAGTTCCTGCAGCAGATCTCCAACAGAGTGAGACGGTTGCCTCATTGCGCACTTTAGAAAAATCTAGTGAAACAATAGGTAGAAAATTTTCTGACTTAAGCCAGCAGCCCACATTTGATGAGAGTAGCTTGTCATGTGTGGGTATAAgtaaaaagggggagaaaagACGGACTAAAGCTGAGAAAACTATCACCCTGCAAGTTCTTCGGCAATATTTTGCTGGAAGCCTAAAAGATGCTGCAAAAAATATTGGCGTTTGTACAACAACTCTGAAAAGAATCTGCCGGCAACATGGTATAAAGCGTTGGCCATCTCGAAAGATCAAAAAGGTGGGCCACTCCTTACAAAAACTTCAACTTGTGATCGATTCAGTTCAAGCTGGCTCTGGTGCTTTTCAAATAGATTCATTCTACTCAAACTTTGCGGAACTAGCGTCTCCAAATTTGTCAGCTGCAAAGCAAAATGATAATCCAAATCCATCAAAATCACCTTCTTCTTCCGGCAGTCAAAGTTCCTTTTCAAGCTCCAGTATTTCGGAGCAACATCACCCCGCACTCACGCAGAATGTAGGCGGTAGTAGCAAAGGTGCTACGATCGGTGGTGCGTTGAAGAGGGTAAGAAGTGAAGCAGAGGTGAAAGGGTCTAGTCATCTAGATGGAGCAAAGGTGTTGCCAAGATCCCAAAGCCAGGAAGCACTTGGCCAAGTGGCTCAAAAGGAGGATGCTTACAGAGTGAAAGTCACGTATGGAGATGAGAAAACCCGGTTTCGGATGCGAAAGAATTGTAGTTACGAAGATGTATTAGGAGAAATTTGTAGGCGATTTAACATGGATGATATCAAGAAATTCGATATCAAGTATTTGGACGATGACTGCGAGTGGGTATTGCTAACATGTGGTGCTGATTTAGAGGAGTGTATTGATGTGTGTCATTCTTCTCAGAGCCGTACAATCAAATTCTCTCTCCATCTTTCTAATCAATA 2510 0.4275 MGDGAMLPGTLLEAPPESSLDFDYMDELFLDGCWLETTIEGSDFLLQSPSTCNLLFDPSFSFSWPVLETNGVLSVSSSHSGNHEERQRPLVNESQETPLDAQLLSQDMINIEGSCSQSEFHSAQGSEVVRRWCNQPTPMFNPAPASSVMERLVRALVYIKDLSRDKDVLVQMWVPVCRGGRQILTTNDLPFSLGSTHLNLAKYREISEKYQFSAENDSKGLLAGLPGRVFGGKVPEWTPDVRFFRSDEYPRVDHAQEYDVRGTLALPVFEQGSRSCLGVIEVVMTTRQIKYRCQLESVCKALEAVDLRSSEISSIQNVKEACNKSYEAALPEIQEVFRSACEMHKLPLVQTWVPCIQQSKDGCRHSNDNYLHCISPVDNACYVGDPSVQAFHEACSEHHLLKGQGVVGGAFMTNQPCFSTDITAMGKTEYPLSHHARMFRLRAAVAVRLRSIHCSRDDFVLEFFLPPDCIDDEEQKKMLTSLSMIIQRVCCSLRVISNDELEEEEETRLSVPAADLQQSETVASLRTLEKSSETIGRKFSDLSQQPTFDESSLSCVGISKKGEKRRTKAEKTITLQVLRQYFAGSLKDAAKNIGVCTTTLKRICRQHGIKRWPSRKIKKVGHSLQKLQLVIDSVQAGSGAFQIDSFYSNFAELASPNLSAAKQNDNPNPSKSPSSSGSQSSFSSSSISEQHHPALTQNVGGSSKGATIGGALKRVRSEAEVKGSSHLDGAKVLPRSQSQEALGQVAQKEDAYRVKVTYGDEKTRFRMRKNCSYEDVLGEICRRFNMDDIKKFDIKYLDDDCEWVLLTCGADLEECIDVCHSSQSRTIKFSLHLSNQ 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01836 836 MobiDBLite consensus disorder prediction 659 707 - -
Bva06g01836 836 MobiDBLite consensus disorder prediction 75 96 - -
Bva06g01836 836 MobiDBLite consensus disorder prediction 719 744 - -
Bva06g01836 836 Pfam PB1 domain 752 832 IPR000270 GO:0005515
Bva06g01836 836 ProSiteProfiles RWP-RK domain profile. 559 640 IPR003035 -
Bva06g01836 836 SUPERFAMILY CAD & PB1 domains 747 834 - -
Bva06g01836 836 PANTHER PROTEIN NLP4 544 835 - -
Bva06g01836 836 MobiDBLite consensus disorder prediction 659 704 - -
Bva06g01836 836 ProSiteProfiles PB1 domain profile. 751 834 IPR000270 GO:0005515
Bva06g01836 836 Gene3D - 752 834 - -
Bva06g01836 836 PANTHER PROTEIN NLP4 18 534 - -
Bva06g01836 836 SMART PB1_new 751 834 IPR000270 GO:0005515
Bva06g01836 836 PANTHER PROTEIN NLP8 544 835 IPR045012 GO:0003700
Bva06g01836 836 Pfam RWP-RK domain 572 620 IPR003035 -
Bva06g01836 836 CDD PB1_NLP 753 832 IPR034891 -
Bva06g01836 836 PANTHER PROTEIN NLP8 18 534 IPR045012 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01836 Bva-Chr6 12639115 12643338 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01836 20 836 NLP Transcription Factor Family AT1G20640 49.942 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Bva06g01836 PB1 7e-17 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01836 - - gmx:100785135 999.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01836 06 12639115 12643338 Bva06g01836 06 12639115 12643338 ECH