Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01834 ATGAAGTCAAaagaactgGTGCTTTTCCTGTCCCTCTGGGAGATTCTTTTGCTTCGGTCTAGTCGGAAGGAATATGTTAACGGAGTTGAAATTGATTCTGTCACTCCATCTACTTCTTCTTTAGGGGATGGAAGAAAGGGAGGATCCTTAGAAGGAAAAGAGGAGAGTGGCAACAGTCCTAAAAGCAGTGCCGCCCGTAGCTTCGCGTTTCGTGAACTTGCGGCTGCAACCGGGGGTTTTAAGCAAGTGAATGCGATTGGAGATGGGGGTTTTGGAAGGGTTTACGGGGGTCATCTGGAAACTGGCCAGGTTGTTGCTATTAAACAATTGAATCACGATGGTCATCAAGATCAAAGGCTCCTGGTTTACGAATACATGCGCATGGGAAGCCTAGAAGATCATCTTTTTGaTACGAACCCAGAGAAAGAACCACTAAGTTGGACTATACGGATGAAGATTGCTGTTGGCGCTGCTAAGGGCCTTGAGTATCTCCATTATTTTGGGCTTGCTAAACTTGGACCAGTTGGAGACAACACTCACGTTTCAACCAGGGTGATGGGAACATATGGCTACTGCGCTCCAGAGAATGCCATGAGTGGCAAATTAACTCTTAAATCTGATATCTACAGCTTTGATGTGGTTTTGTTGGAGTTGATCACTGGACGTAGGGCTATAGATGTCAGTAGGAGACCAGGGGAGCAAAACTTAGTTGCATGGTCTCGCCAGTTCTTGAAGGACCGGAGAACGTTTGTAGAAATGATTGATCCTCTTTTGCAAGGGCGCTTCCCGTTGCGCTGTTTGCATCACGCAATTGCTATAACTGCCATGTGCCTCCAGGAGCAGCCAAATTTTCGTCCATTGATTAGTGATGTTGTTGTTGCACTGGAGTACGTGGGCTCTGTCCCAGAAGTCCGTAAAGACCACAATCACCAGAACCAGAGTCTAGACAGAGTACAGgATACTATACTGTGGAAAGAGAAGTGGATAATTGTTATGTATTTCTACGGtacaagggaaaaagaaaagaaaagtctgCTGTGCTGTGCTGTGCTGTCCCAAAATTGTGAAATAACGCCTGCCGACCACATCGGAATCGGAAGAAAGGGTGAGCTTGGGCATGTTACCACCAAAGTCAACGACAGACAATACAATACCCCTTCAAAAATGGATGAGTTGATGGAGACTTGGTCAGGTCAAGGAAGAAGCATGCGTCGTATGtatgTCGATAATGATGACCGCAGCCGCCGTCCCGCCACTCATCCATCGTCTGATTCTGCAACAGAAAGCAAGTCATCATCGAACAGAGGCAGAGTGAGCAGCAATAATCAGAATGAATTGGAGACGAGTGGAGGAGACAAGACGGTTAAGTTGAAcggcaaagaagaaaaagtgcGGAGAACAAATGCAACGGTGACGCCAAATCTGAAAATATTCAGTCTGGATGAGTTGAAGAGTGCTACCAAAAATTTTAGACCAGACACGGTGCTGGGAGAAGGTGGTTTTGGCCGCGTTTTCAAGGGCTGGATTGACGATAAAACCTACAAGCCTTCCAAAGTTGGCGTCGGTATCCCCGTCGCCGTCAAGAAATCTAATTCTGATAGCCTCCAAGGATTGAAAGAATGGCAGAgtgaggtgaaattcttgggaAAGTTTTCCCATCCGAACCTTGTTAAACTGCTTGGCTACTGCTGGGAGGAAAATCAATTCCTCCTCGTATACGAATACATGCAAAAGGGAAGCTTGGAAAACCACCTCTTCGGAAGAGGTCCGGAGCCACTTGCGTGGGATATAAGGCTCAAGATAGCCATAGGAGCTGCTCGAGGACTCGCCTTCTTGCACAATTCAGAAAAGTCCGTCATATATCGAGACTTCAAGTCCTCCAACATTTTGCTCGATGGGgctTATAATGCAAAGCTTTCGGATTTTGGATTGGCAAAGTTTGGGCCAACGAGCGACAGATCCCACGTAACCACGCGGGTCATGGGCACATACGGCTATGCAGCACCGGAGTATATGGCTACTGGTCATCTATACGTGAAAAGCGACGTATACGGGTTTGGGGTTGTGCTGTTGGAAATGCTGACGGGCTTAATAGCACTGGACCCAAATCGACCCTCGGGAGAACAAAATCTGGTGGAATACTGCAAAGCATCTCTAAGCACAAAAAAGAAGCTGAAGAAGATAATGGACCCACAACTGGGCGAACATTATCCAATTGCGGCTGCATTTCAAGTAGCCCAGCTTATAGACAAGTGTTTGGAGTCAGACCCAAAAAATCGACCGTCCATGGAAGAGGTTTTGGATGTTTTAGAGAAGGCCTACGAAATTAAGTATAAGCCCAAGGCCCGAGATAAGTTGAAGAAAGGCGGCCAGCTAGTTGTGCATCACTCCCACCTCGTGTGGCAATTTGCATG 2414 0.4536 MKSKELVLFLSLWEILLLRSSRKEYVNGVEIDSVTPSTSSLGDGRKGGSLEGKEESGNSPKSSAARSFAFRELAAATGGFKQVNAIGDGGFGRVYGGHLETGQVVAIKQLNHDGHQDQRLLVYEYMRMGSLEDHLFDTNPEKEPLSWTIRMKIAVGAAKGLEYLHYFGLAKLGPVGDNTHVSTRVMGTYGYCAPENAMSGKLTLKSDIYSFDVVLLELITGRRAIDVSRRPGEQNLVAWSRQFLKDRRTFVEMIDPLLQGRFPLRCLHHAIAITAMCLQEQPNFRPLISDVVVALEYVGSVPEVRKDHNHQNQSLDRVQDTILWKEKWIIVMYFYGTREKEKKSLLCCAVLSQNCEITPADHIGIGRKGELGHVTTKVNDRQYNTPSKMDELMETWSGQGRSMRRMYVDNDDRSRRPATHPSSDSATESKSSSNRGRVSSNNQNELETSGGDKTVKLNGKEEKVRRTNATVTPNLKIFSLDELKSATKNFRPDTVLGEGGFGRVFKGWIDDKTYKPSKVGVGIPVAVKKSNSDSLQGLKEWQSEVKFLGKFSHPNLVKLLGYCWEENQFLLVYEYMQKGSLENHLFGRGPEPLAWDIRLKIAIGAARGLAFLHNSEKSVIYRDFKSSNILLDGAYNAKLSDFGLAKFGPTSDRSHVTTRVMGTYGYAAPEYMATGHLYVKSDVYGFGVVLLEMLTGLIALDPNRPSGEQNLVEYCKASLSTKKKLKKIMDPQLGEHYPIAAAFQVAQLIDKCLESDPKNRPSMEEVLDVLEKAYEIKYKPKARDKLKKGGQLVVHHSHLVWQFA 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01834 804 Gene3D Phosphorylase Kinase; domain 1 51 129 - -
Bva06g01834 804 Pfam Protein tyrosine and serine/threonine kinase 167 293 IPR001245 GO:0004672|GO:0006468
Bva06g01834 804 Pfam Protein tyrosine and serine/threonine kinase 494 769 IPR001245 GO:0004672|GO:0006468
Bva06g01834 804 MobiDBLite consensus disorder prediction 420 451 - -
Bva06g01834 804 MobiDBLite consensus disorder prediction 408 461 - -
Bva06g01834 804 SUPERFAMILY Protein kinase-like (PK-like) 468 770 IPR011009 -
Bva06g01834 804 MobiDBLite consensus disorder prediction 35 62 - -
Bva06g01834 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Bva06g01834 804 PANTHER SERINE/THREONINE-PROTEIN KINASE CX32, CHLOROPLASTIC-RELATED 436 787 - -
Bva06g01834 804 PANTHER SERINE/THREONINE-PROTEIN KINASE CX32, CHLOROPLASTIC-RELATED 116 165 - -
Bva06g01834 804 PANTHER SERINE/THREONINE-PROTEIN KINASE CX32, CHLOROPLASTIC-RELATED 167 314 - -
Bva06g01834 804 CDD STKc_IRAK 496 772 - -
Bva06g01834 804 Gene3D Transferase(Phosphotransferase) domain 1 576 791 - -
Bva06g01834 804 ProSitePatterns Protein kinases ATP-binding region signature. 86 108 IPR017441 GO:0005524
Bva06g01834 804 SUPERFAMILY Protein kinase-like (PK-like) 67 310 IPR011009 -
Bva06g01834 804 ProSiteProfiles Protein kinase domain profile. 35 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01834 804 ProSitePatterns Protein kinases ATP-binding region signature. 496 529 IPR017441 GO:0005524
Bva06g01834 804 PANTHER OS01G0588500 PROTEIN-RELATED 436 787 - -
Bva06g01834 804 PANTHER OS01G0588500 PROTEIN-RELATED 116 165 - -
Bva06g01834 804 PANTHER OS01G0588500 PROTEIN-RELATED 167 314 - -
Bva06g01834 804 Gene3D Phosphorylase Kinase; domain 1 474 575 - -
Bva06g01834 804 Gene3D Transferase(Phosphotransferase) domain 1 130 166 - -
Bva06g01834 804 Gene3D Transferase(Phosphotransferase) domain 1 167 298 - -
Bva06g01834 804 ProSiteProfiles Protein kinase domain profile. 490 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01834 Bva-Chr6 12616419 12623813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01834 471 770 Glycoside Hydrolase AT3G07070 49.180 2.95e-90 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva06g01834 PK_Tyr_Ser-Thr 4.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01834 - - aprc:113865973 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01834 06 12616419 12623813 Bva06g01834 06 12616419 12623813 ECH