Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01833 ATGAAAGGTGGCAAATCTAAGGCCGAATCTAAGAAAGCCGATGCCAAGCTAGCCGTGAATAAGAAAGGTGGCCCCGCCACCAAAGCAGGCAGGAAGCAGAGTAAGGGGAAGGCTGCCAAAGACCCCAACAAGCCAAAGAGACCGCCCAGTGCCTTCTTCGTTTTTAtGGAGGAATTCCGGAAGCAGTTCAACAAGGAACATCCTGACAACAAATCAGTGTCTGCCGTTGGCAAAGCTGCTGGAGCAAAATGGAAGTCATTGTCTGATGCTGAGAAAGCACCATATGCAGCTAAGGCCGAGAAACGAAAGGCTGAatatgagaagagtatgaaagCATATAACAAGAGACAGGCTGAAGGTCCCAATGCTGCAGAGGAAGATGAGTCTGAGAAATCAATGTCAGAGGTgaatgatgaagatgaaggagACGAAGACGGCAGTGGCGAGgaagatgatgatgagta 464 0.4397 MKGGKSKAESKKADAKLAVNKKGGPATKAGRKQSKGKAAKDPNKPKRPPSAFFVFMEEFRKQFNKEHPDNKSVSAVGKAAGAKWKSLSDAEKAPYAAKAEKRKAEYEKSMKAYNKRQAEGPNAAEEDESEKSMSEVNDEDEGDEDGSGEEDDDE 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01833 154 SUPERFAMILY HMG-box 33 121 IPR036910 -
Bva06g01833 154 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 1 153 IPR031061 -
Bva06g01833 154 MobiDBLite consensus disorder prediction 64 154 - -
Bva06g01833 154 MobiDBLite consensus disorder prediction 131 154 - -
Bva06g01833 154 Coils Coil 96 116 - -
Bva06g01833 154 Pfam HMG (high mobility group) box 45 114 IPR009071 -
Bva06g01833 154 PANTHER HIGH MOBILITY GROUP B PROTEIN 2-RELATED 1 153 - -
Bva06g01833 154 SMART hmgende2 44 115 IPR009071 -
Bva06g01833 154 MobiDBLite consensus disorder prediction 1 18 - -
Bva06g01833 154 MobiDBLite consensus disorder prediction 1 51 - -
Bva06g01833 154 Gene3D High mobility group box domain 28 129 IPR036910 -
Bva06g01833 154 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 45 114 IPR009071 -
Bva06g01833 154 CDD HMGB-UBF_HMG-box 45 111 - -
Bva06g01833 154 MobiDBLite consensus disorder prediction 94 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01833 Bva-Chr6 12614533 12616413 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Bva06g01833 HMG_box 1.8e-24 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01833 K25507 - jre:109011479 194.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01833 06 12614533 12616413 Bva06g01833 06 12614533 12616413 ECH