Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01829 ATGGCTGCAAGCGGGGATGCAAGTAATGATCCTGGCAGCCCGTCAGATGAGAACTATCATTTTGAGAGGTTGCACATTGAGCCCATGTATGATGCTTTCGTATGTCCTCTAACAAAGCAAGTTATGCGCGATCCTGTTACCTTAGAAAATGGGCTGACTTTCGAACATGAAGCAATTGAAAATTGGTTCAAGGAATGCAGGGAGAGTGGACGGAAACCAGTTTGCCCTTTGACATTAAAAGAACTGAGAAGCACAGAACTGAATCCCAGTATAGCTTTAAGTAAGACCATTGGAGAGTGGACTGCCAGGAATGAAGCTGCACAGTTAGATATGGCTCGGCGATCATTGAATATGGGAAGTCCAGAAAATGAAACTCTGCAGGCTTTACTGTATGTCCGAGACATCTGCCAAAGAAGTCAGTCCAACAAGCAAGTTGTCCGTAATGCAGGGCTTTTACCTATGGTTGTTGACATGTTGAAGAGCAGTAGCCGAAAGGTTCGCTCTAGAGCTTTGGAAACCCTAAGAACTGTGGTGGAGGAAGACGATGAGAATAAGGAAATTTTGGCTGAGGGGGATACTGTGCGCACAATAGTGAAGTTCCTTTCCCATGAGCTTTctaaagaaagagaggaagcTGTATCTTTGCTTTATGAACTCTCAAAATCTGAAACCCTGTGTGAGAAGATTGGTTCAATCAATGGAGCTATTCTTATATTAGTTGGAATGACAAGCAGCAAATCAGAAGATCTTTCCACCGTTGCAAAGGCTGATAAAACACTGGAGAATCTGGAGAAGTGTGAGAATAATGTACGGCAGATGGCTGAAAATGGAAGACTGCGGCCTCTTCTGAACCAGCTTCTTAAAGGTCCACCAGAAATCAAACTGTCCATGGCTGGATACCTAGGTGAGCTGGTTTTGAACAATGATGTAAAAGTCCTTGTTGCTAAAACTGTTGGTTCATCTTTGATCAATATAATGAAAGGTGGTAATTTGCATTCAAGAGAAACTGCTCTGAAAGCTCTAAATCAGATATCATCAAGTGAGCCAAGTGCTAAGGTTTTGATAGAGGCTGGAATACTTTCCCCGCTTGTCAAGGACCTTTTCGCAGAGGGTCCCAATCACCTTCCCATGCGACTGAAAGAGGTCTCTGCTACAATCCTTGCCAATGTTGTCTACTCGGGAGATGACTTTGACTCCATTCCAGTTGGACCTGATCACCAGACACTGGTTTCAGAGGACATAGTTTGTAATCTACTCCATCTCATTAGCAACACTGGTCCAGCTATTGAGTGCAAACTTCTTCAGGTTCTTGTCGGGCTTACTAGTTCTCAAGCTACAGTTCCGAGTGTTGTTGCTGCGATAAAAAGCTCTGGTGCCACTGTCAGTCTGGTTCAATTCATTGAGGCTCCACAGAAAGATTTGCTTGTAGCTTCCATAAAACTTCTTCAGAATCTGTCCCCCCACATGGGTCAAGAATTAGCTGATGCACTGCGTGGTTCAGTTGGACAGCTTGGTAGTCTAATTAAAGTCATATCAGAAAATATAGGGATCTCTGAAGAACAAGCAGCAGCTGTTGGCCTTTTAGCTGATCTACCTGAGAGGGATTTGGGACTCACAAGACAGATGCTAGATGAAGGTGCCTTTCAGCTGGTCATCTCCAGAGTGATTTCTATCAGGCAAGGGGAGATCAGAGGCGGCCGCTTTATGACACCATTTCTCGAAGGGCTAGTGAAAATTCTTGCAAGGGTTACCTATGTCTTGGCCGATGAGCCTGATGCCATTGCACTGTGTCGTGAGAACAGCCTTGCAGCACTCTTTATTGAACTGCTTCAGACCAATGGACTGGATAATGTACAGATGGTTTCTGCTATAGCTTTGGAGAATTTATCACaagaatgtaaaaatttaacaaaattgccTGAGGTGCCACCACCTGGTGTTTGTGCTTCAATTTTTCCATGCTTGAGTAAACAGCCTGTTATAACAGGACTGTGTAGGGTCCATCAAGGGATATGttcattaaaagaaacattttgcCTCTTGGAAGGACGGGCAGTGAGTAAGTTGGTAGCTCTACTGGACCACACTAATGTGAATGTGGTCGAGGCAGCACTTGCAGCCCTATCTAGTTTGTTAGATGATGGAGTTGATATCGACCAGGGGGTAATGGTGCTGTGTGACGCAGAGGGAATCAAGCCTATACTCGATGTGTTGCTGGAGAAACGGTCAGACAATCTGAGGAGGAGGGCAGTTTGGGCAGTCGAGAGACTATTGCGAATTGAGGATATAGCCTATGAAGTTTCCGGAGACCAAAACGTGAGCACTGCTCTCGTTGACGCCTTCCAGCATGCTGACTACCGAACTAGGCAGATTGCCGAGCGTGCTCTCAAGCATGTTGATAAGATACCCAACTTTTCAGGCATCTTTCCCAACATGGGATA 2441 0.4404 MGQELADALRGSVGQLGSLIKVISENIGISEEQAAAVGLLADLPERDLGLTRQMLDEGAFQLVISRVISIRQGEIRGGRFMTPFLEGLVKILARVTYVLADEPDAIALCRENSLAALFIELLQTNGLDNVQMVSAIALENLSQECKNLTKLPEVPPPGVCASIFPCLSKQPVITGLCRVHQGICSLKETFCLLEGRAVSKLVALLDHTNVNVVEAALAALSSLLDDGVDIDQGVMVLCDAEGIKPILDVLLEKRSDNLRRRAVWAVERLLRIEDIAYEVSGDQNVSTALVDAFQHADYRTRQIAERALKHVDKIPNFSGIFPNMG 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01829 325 Gene3D - 5 153 IPR011989 -
Bva06g01829 325 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 43 1 323 - -
Bva06g01829 325 SMART arm_5 101 143 IPR000225 GO:0005515
Bva06g01829 325 SMART arm_5 230 271 IPR000225 GO:0005515
Bva06g01829 325 SMART arm_5 184 225 IPR000225 GO:0005515
Bva06g01829 325 SUPERFAMILY ARM repeat 31 313 IPR016024 -
Bva06g01829 325 Gene3D - 189 324 IPR011989 -
Bva06g01829 325 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 1 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01829 Bva-Chr6 12585922 12590022 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01829 1 325 U-box Gene Family AT1G76390 65.337 7.12e-143 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01829 - - adu:107460240 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01829 06 12585922 12590022 Bva06g01829 06 12585922 12590022 ECH