Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01827 ATGACAAATGGTAAACCCCCACGGCACCTCTCCGCCATGAGGCATAGCGTTAGCTCTACAAGATTGCTGGCTGCAGTggatttgagtttgGACATGAGGATTGTTGGAAATAAGTCATCATCTGACGAGAAGGCTGAGTTTCTACCTATATTTCGATCAGGAAGTTGCGCTGAAAGAGGACCTAAACAGTATATGGAAGATGAACACTTATGTGTAGATAATCTTACTGAACATCTAGGGTCAGCTGCTGATATTCCTTCTCCTGGAGCTTTCTATGGGGTGTTTGATGGTCATGGAGGTACAGACGCGGCTGcatttataagaaataacaTCCTCAGCTTCATAGTTGAGGATTCCCATTTTCCAACTTGTATGGAGAAGGCAATTAGAAGTGCCTTTCTGAAGGCCGATTATGCATTTGCAGATGCTAGTCCGCTTGATATCTCTTCTGGCACCACTGCTTTAACTGCTCTTGTATTTGGAAGGACCCTGATAATTGCCAATGCTGGGGACTGTCGAGCCGTATTGGGGAGGCGAGGTAGAGCTATTGAGATGTCAAAAGACCACAAACCCAATTGCATGTCAGAAAAGCTAAGGATTCAGAAACTTGGTGGAGTAGTATACGATGGATACCTGAATGGGCAACTCTCTGTTGCCCGTGCCCTAGGAGACTGGCACATGAAGGGTCCCAAAGGTTCTGCGGGCCCTTTAAGCGCGGAACCGGAGTTGCAGGAAGCCCACCTCAGCGAGGATGATGAGTTCTTGATTATGGGCTGTGATGGCCTATGGGATGTGATGAGCAACCAATGTGCCGTGACAATGGCGAGGAAAGAATTGATGCTACATAATGATCCTGAGCGCTGTTCAAGAGAGCTCGTCAGAGAGGCCCTTAAGCGCAACACTTGTGATAATTTAACAGTTATTGTAGTTTGTTTCTCCCCAGATCCTCCTCCTCGGATAGAAATGCCtcaatctcaatctcaatctcaatctCGAGTTAGAAGGAGTATATCAGCAGAGGGACTCAATCTACTTAAGGGTGTACTCGACTCTAACTCGTG 1061 0.4486 MTNGKPPRHLSAMRHSVSSTRLLAAVDLSLDMRIVGNKSSSDEKAEFLPIFRSGSCAERGPKQYMEDEHLCVDNLTEHLGSAADIPSPGAFYGVFDGHGGTDAAAFIRNNILSFIVEDSHFPTCMEKAIRSAFLKADYAFADASPLDISSGTTALTALVFGRTLIIANAGDCRAVLGRRGRAIEMSKDHKPNCMSEKLRIQKLGGVVYDGYLNGQLSVARALGDWHMKGPKGSAGPLSAEPELQEAHLSEDDEFLIMGCDGLWDVMSNQCAVTMARKELMLHNDPERCSRELVREALKRNTCDNLTVIVVCFSPDPPPRIEMPQSQSQSQSRVRRSISAEGLNLLKGVLDSNS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01827 353 PANTHER PROTEIN PHOSPHATASE 2C 1 334 IPR015655 GO:0004722|GO:0006470
Bva06g01827 353 Gene3D - 33 315 IPR036457 -
Bva06g01827 353 SUPERFAMILY PP2C-like 46 313 IPR036457 -
Bva06g01827 353 SMART PP2C_4 42 310 IPR001932 -
Bva06g01827 353 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
Bva06g01827 353 SMART PP2C_SIG_2 67 312 IPR001932 -
Bva06g01827 353 CDD PP2Cc 51 312 IPR001932 -
Bva06g01827 353 Pfam Protein phosphatase 2C 53 304 IPR001932 -
Bva06g01827 353 ProSiteProfiles PPM-type phosphatase domain profile. 52 312 IPR001932 -
Bva06g01827 353 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01827 Bva-Chr6 12580083 12582329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01827 1 350 PP2C-type Phosphatase Gene Family AT2G33700 76.857 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01827 K14803 - qsu:112023621 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01827 06 12580083 12582329 Bva06g01827 06 12580083 12582329 ECH