Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01823 ATGAGTCGCCCCTTGAGATTCCTAGGCGAGCATAACTCGTCATCCACCACCGATCCACCCAACTCCGCCACCGTAGACTCTGACTTCGTTGTTATCCTTGCCGCCCTCCTCTGCGCTCTAATCTGCGTTTTAAGCCTCGTGGCCGTCGCCCGCTGCGCCTGGCTCCGCCGATTGCGTGTTTCCGCCGGCAGCAGCGCGACTGGGCGTCCATCATCAGCACCACCTGCTTCGGCCAACAAAGGCCTCAAGAAGAAGATTCTGCGATCTCTTCCGAAGATGGCGGTGGCGGCTGAATCCGCCGCGAAATTGTCGGATTGTGCGATCTGCCTGAGCGAATTGAGTGCGGGAGATGAAATCCGAGTGCTACCGCAGTGCGGGCATGGGTTCCACGTGTCGTGCATCGATACGTGGTTTGGATCGCATTCGTCGTGTCCGTCTTGTCGTCGGATTCTGGGGGTTGGCAGTGGCGGTAAGTGTGACAGGTGTGGCGGATTGCCGGCAACTGGAACTTCCATGAGCGCAGCACCTCATGCTCACGATCAGTCGGATTTAGAAGCCAGAATGAAGGGAAGAGAGGAGTA 581 0.58 MSRPLRFLGEHNSSSTTDPPNSATVDSDFVVILAALLCALICVLSLVAVARCAWLRRLRVSAGSSATGRPSSAPPASANKGLKKKILRSLPKMAVAAESAAKLSDCAICLSELSAGDEIRVLPQCGHGFHVSCIDTWFGSHSSCPSCRRILGVGSGGKCDRCGGLPATGTSMSAAPHAHDQSDLEARMKGREE 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01823 193 SMART ring_2 106 147 IPR001841 -
Bva06g01823 193 PANTHER RING-H2 FINGER PROTEIN ATL8 1 189 - -
Bva06g01823 193 MobiDBLite consensus disorder prediction 7 21 - -
Bva06g01823 193 Pfam Ring finger domain 105 148 IPR001841 -
Bva06g01823 193 SUPERFAMILY RING/U-box 86 152 - -
Bva06g01823 193 MobiDBLite consensus disorder prediction 1 21 - -
Bva06g01823 193 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 152 IPR013083 -
Bva06g01823 193 CDD RING-H2_PA-TM-RING 105 148 - -
Bva06g01823 193 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
Bva06g01823 193 MobiDBLite consensus disorder prediction 170 193 - -
Bva06g01823 193 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 1 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01823 Bva-Chr6 12566235 12566816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01823 1 159 C3H Transcription Factor Family AT1G20823 59.880 4.80e-61 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01823 - - tcc:18591745 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01823 06 12566235 12566816 Bva06g01823 06 12566235 12566816 ECH