Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01815 ATGATAGTGAGAGACTGCAGCAGAATTCCCACGGGCCATTATGGTATCGAAAATGTTGACGCCACTTTGCAACAACAACATGCAACTTCCTTGGAAAAGGATCAAAATGGGGGATCCCTTCGGGAGGCCAACGACCACAAGAGTACCAAGTCACCTACTCATTCTCACCGCGAAGAATATCAATTTATGGTCGATGACGCTGATGATAGTAACTCTCCCGATAATAATGTTAGTAATTATTCTAGTCCAAGTTTAATGCCAGAAACCAGGAGCACTGGTGACAAAACCTACAACCAGAATCAGCTTAAAGATGCTAGGTCCCATTCACATGAGGAGTTGTTGATTCCAAAGgctaaagaaaagaatctcAGAGAAATGAAGAACGTGCCAGATGATACTCAGATGACTGGGGAGAGGGCCATGGAATTTAAACCCCCTAAGTTTTATGGGGAGCCACTAAACTGCCTCAAGGCTGTAGGTTGTGGAGAGCTGTCATTAAACTGGGTGGATATGATCTGTGGTGATGGGAATGCCTGCTTCCTGTTTCATGGTTGTGTTGATACTTTAATAGATGCTGCAGCGGCCAGCCTTAGCAATTTCAAGGCATTAAATCTGGTAACTGCATCCAAGTTATGGCGGCAAATAGGAGAGTCTTTCCACCCCCTTAAGACTTGCACTACAGTCTCTTGGACGTTTAGAAGTTTTTATGAGAAGGCACTCTTGGAATTTGAAAAGCATAAGAGAGAGATTGGGGAGCTACAGCTCCCTGTTGGGTCATTCCGTCAATCTTTAAGTGTGGAAAAGGAGACGAGTATATACCAGACTCCTGGATCTGGAAATGATGAGGTTGCTGAACCAATTATTAAGGAAAAGAACATAAATTATACCCCAAAGCGCGAAAAGAACCTCAAAAGTATTGGTGTGATTAATGAACAGAAAACATTGCCTGTCCTGGAGCATGCTGAGAGAAATGCTAATATTGATGGAGATAAACAGTTAAGATTACTggttatttatgttaatcGACCTTTGCTGTATTGGTGTCCTGTTCTGGGTGTTCATCAGTGGCTGGTTTTGAATTGTGAGACATTAGTGGTAGATTGGGGTAGCCGAGATCAATATGCGGGAAACTTCCTTGCCCAGAAGGACTGTTTTGAAGTATATGCACTAGTTCCTGGGCTTCTGCGTGAAGAGGTACGAGTGCAATCAGATCCAGCTGAACGTCTTGTTATAATAGGTCAACCAGAGCACGTTGACAATCCATGGGGAATCACACCCTTTAAGAagGTTGTGAGCTTGCCTGGAAGGATTGATCCGCTTCAGACATCAGCTGTTGTTAGCCTTCGTGGTTGTTCCTTTCGAGCAGGGGGCTATGTGATTTTTTCTAATGACTGgattcttaaattttgtggACATGGCTATGTGTGGAACTGTTCTAGTCCCGTTGGATTAGTTGAAAGGGCTATCTA 1469 0.4234 MIVRDCSRIPTGHYGIENVDATLQQQHATSLEKDQNGGSLREANDHKSTKSPTHSHREEYQFMVDDADDSNSPDNNVSNYSSPSLMPETRSTGDKTYNQNQLKDARSHSHEELLIPKAKEKNLREMKNVPDDTQMTGERAMEFKPPKFYGEPLNCLKAVGCGELSLNWVDMICGDGNACFLFHGCVDTLIDAAAASLSNFKALNLVTASKLWRQIGESFHPLKTCTTVSWTFRSFYEKALLEFEKHKREIGELQLPVGSFRQSLSVEKETSIYQTPGSGNDEVAEPIIKEKNINYTPKREKNLKSIGVINEQKTLPVLEHAERNANIDGDKQLRLLVIYVNRPLLYWCPVLGVHQWLVLNCETLVVDWGSRDQYAGNFLAQKDCFEVYALVPGLLREEVRVQSDPAERLVIIGQPEHVDNPWGITPFKKDVWLPGCELAWKD 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01815 442 MobiDBLite consensus disorder prediction 38 64 - -
Bva06g01815 442 CDD ARID 206 244 - -
Bva06g01815 442 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 204 434 IPR045147 GO:0006357
Bva06g01815 442 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 24 157 IPR045147 GO:0006357
Bva06g01815 442 MobiDBLite consensus disorder prediction 29 109 - -
Bva06g01815 442 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 5 204 434 - -
Bva06g01815 442 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 5 24 157 - -
Bva06g01815 442 SUPERFAMILY ARID-like 204 255 IPR036431 GO:0003677
Bva06g01815 442 MobiDBLite consensus disorder prediction 68 103 - -
Bva06g01815 442 Gene3D - 197 255 IPR036431 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01815 Bva-Chr6 12533058 12545393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01815 102 435 ARID Transcription Factor Family AT1G76510 41.620 3.62e-71 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01815 - - adu:107461292 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01815 06 12533058 12545393 Bva06g01815 06 12533058 12545393 ECH