Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01814 atggagAAGATGCTATCGGCGAAGGACGCGTTTGAGAAGCTAGAGAAGGTAGGAGAAGGGACGTATGGGAAGGTGTACAGGGCAAGAGAGAAAGCAACCGGCAAGATCGTTGCCCTGAAGAAGACTCGCCTTCACGAGGACGAAGAAGGTGTCCCTCCTACCACTCTCCGTGAGGTTTCCATTTTGCGCATGCTCTCTAGGGATCCTCATGTCGTAAGATTGATGGATGTAAAACAAGGTCAGAACAAGGAAGGGAAGACAGTGCTCTACTTGGTGTTCGAGTTCATGGACACTGACCTCAAGAAATTCATTCGAAGTTTTCGTCAGACTGGGGAAAACATCCCTTCCAAAACAactaaaAGCTTGATGTACCAACTCTGCAAGGGCGTTGCCTTCTGCCACGGTCATGGAATCTTGCACAGAGATTTGAAGCCTCATAACCTCTTGATGGACCGAAAAACAATGATGCTTAAAATAGCTGATCTTGGACTTGCTCGAGCATTTACTGTGCCAATCAAAAAATACACTCATGAGATACTAACCCTCTGGTATAGAGCTCCCGAAGTCCTTTTGGGAGCTACGCATTACTCTATGGCGGTGGATATGTGGTCTGTTGGCTGCATATTTGCTGAACTTGTGACCAAGCAAGCACTCTTTCCTGGTGATTCTGAGCTTCAACAACTCCTGCATATATTCAGGTTATTGGGTACTCCAAACGAAGAGGTGTGGCCAGGCGTTAGTAAACTAATGAATTGGCACGAGTACCCACAGTGGAGCCCTCAACATCTATCAACGGCTGTTCCTGGTTTGGATGAGCTTGGATTGGATCTGTTATCGCAAATGCTGCAATACGAGCCTTCCAAGCGGATTTCAGCAAAGAAAGCAATGGAACACCCTTACTTTGATGACTTAGACAAGACGTATCTTTA 929 0.4596 MEKMLSAKDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGKTVLYLVFEFMDTDLKKFIRSFRQTGENIPSKTTKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSMAVDMWSVGCIFAELVTKQALFPGDSELQQLLHIFRLLGTPNEEVWPGVSKLMNWHEYPQWSPQHLSTAVPGLDELGLDLLSQMLQYEPSKRISAKKAMEHPYFDDLDKTYL 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01814 309 Gene3D Phosphorylase Kinase; domain 1 6 97 - -
Bva06g01814 309 SUPERFAMILY Protein kinase-like (PK-like) 8 305 IPR011009 -
Bva06g01814 309 PANTHER - 6 307 - -
Bva06g01814 309 SMART serkin_6 11 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01814 309 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Bva06g01814 309 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Bva06g01814 309 Pfam Protein kinase domain 11 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01814 309 ProSiteProfiles Protein kinase domain profile. 11 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01814 309 Gene3D Transferase(Phosphotransferase) domain 1 99 308 - -
Bva06g01814 309 PANTHER CELL DIVISION PROTEIN KINASE 6 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01814 Bva-Chr6 12530490 12532676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01814 5 309 Core Cell Cycle Gene Families AT1G20930 87.255 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Bva06g01814 Pkinase 2.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01814 K07760 - gmx:100808302 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01814 06 12530490 12532676 Bva06g01814 06 12530490 12532676 ECH