Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01796 ATGAAGCTGCGAATCTCGTTCAGTGCTCTTGCTTTGTGCCTGTTATGTGTAACTCCGTTTTTTGTTAGATCagtatcttcttcttcaaaacCAAAAGACCCATTCCTTGGAATTGCTCCTGAAGATGACAAGTATTACAAATCGTCGGATgtaataaaatgtaaagacGGATCCAAGAAATTCACCAAAGTCCAGCTCAATGACGATTTCTGTGATTGCCCTGACGGCACCGATGAGCCGGGTACATCAGCATGTCCAGGTGGAAAATTCTATTGTCAAAATGCAGGACACATcccaattttcatattttcgtCTAGAGTGAACGATGGAATATGTGATTGCTGTGATGGAAGTGATGAATATGATGGTAAAGTAAAGTGCCCAAATACTTGCTGGGAGGCTGGTAAAGTTGCTCGAGATAAACTGAAAAGAAAGATTGCCACATATCAGGAGGGAGTCACATTGCGAAAGCAAGAAGTTGAAAAGGCAAAGCTAGCTCTTGCAAAAGATGAGGCAGaacttttaaaacttaaagaagaagaaagtataCTAAAAAGGATTGTGAAACAGCTAAAGGAGCGTAAAGAACAAATAGAAAAGGCCGAGGAGAAGGAACAATtacagaaggaaaaggaagagaaggagaaaaaggaagcTGAGAAGAAAGCTAACAGTGGGACATTTAAAGCAGATGAAGAAGATATGGGGCATGGAAATGAAGCTGGTAAGCAGTCTATTGGTGAAGATAATGCTGTGGCAACTAACCATGATAACATTGGACTTATGGATGATTCTTCTAGAGATCAGGATGCAGCAGAGGAAGACAAATTAGCAGATATACTTAATGATGCGTCTGCTAATATTGCTGAAAGTGAAAGATCATTGCATAAGGAAGCAGAAGAGAATGCAGTGGTAGATAAGGGAGAACTTTCTGTtgaacatgaaattaattttaaggatGAAAAGGAGGAATCTTCTGATGAAGTCATCAAAAAAGGGGATTATGCATACGAAAACACTCAGGGATTGTCAAAGGAAGAGCTGGGCCGGCTTGTTGCTTCTCGTTGGACTAGAGAAAATCCCGATAACCCAAGCAAGGTAGCTGATACTGCACAAGATGGTAATGATGATCATGAAGATCGTTCAAAGGAGACAGATCATGAGGAATATGAAGGCTATGCTTCTGAAGCTGATGATGACAATCACAgatatgatgatgaagatatAGACGATGAAATTTATGGAGACGATAGACAGGAGGAACATGATGACCATAGTTCCTCATACAACTCTTACAGTGAGACTGAACCAGATTTGTCTGATGATACTGCAACAGAAAATCCTTCTTGGTTGGAGAAAATACAGAGAACTGTACGCAACATTTTCCAGGCTGTTCATTTATTCCAGACTCCAGTTAACCAGTCAGATGTTGCTTACATACGCAAGGAATATGACCAGTCAAGTGTGAAATTGTCTAAAATGCAGTCAAGAATATCTAGTTTGATGCAAAAGCTAAAGCATGATTTTGGTCCAGAGAAGGAGTTCTATTCTTTCTATGACCGTTGTTTTGAGGGAAAAGAGAACAAGTACACTTACAAAGTCTGTCCGTATAAACAGGCTTCTCAGGAAGAGGGCTATTCAACCACTCGTTTGGGGCAATGGGACAAATTTGAGGACTCCTACAAAGTAATGATTTTTTCTAATGGCGATAAATGCTGGAATGGGCCTGATAGGAGTTTGAAGGTGAAGCTAAAATGTGGGTTGAAAAATGAGATTACTGATGTAGATGAACCAAGCCGTTGCGAATATGTAGCTGTATTATCTACCCCAGCCCTTTGCCAAGAGGAAAAGCTCAAGGAATTACAACAAAAGCTAGAGGCGATGAGTAAGGAACAACCACAGGCGCACGACGAGCTGTG 1919 0.3788 MKLRISFSALALCLLCVTPFFVRSVSSSSKPKDPFLGIAPEDDKYYKSSDVIKCKDGSKKFTKVQLNDDFCDCPDGTDEPGTSACPGGKFYCQNAGHIPIFIFSSRVNDGICDCCDGSDEYDGKVKCPNTCWEAGKVARDKLKRKIATYQEGVTLRKQEVEKAKLALAKDEAELLKLKEEESILKRIVKQLKERKEQIEKAEEKEQLQKEKEEKEKKEAEKKANSGTFKADEEDMGHGNEAGKQSIGEDNAVATNHDNIGLMDDSSRDQDAAEEDKLADILNDASANIAESERSLHKEAEENAVVDKGELSVEHEINFKDEKEESSDEVIKKGDYAYENTQGLSKEELGRLVASRWTRENPDNPSKVADTAQDGNDDHEDRSKETDHEEYEGYASEADDDNHRYDDEDIDDEIYGDDRQEEHDDHSSSYNSYSETEPDLSDDTATENPSWLEKIQRTVRNIFQAVHLFQTPVNQSDVAYIRKEYDQSSVKLSKMQSRISSLMQKLKHDFGPEKEFYSFYDRCFEGKENKYTYKVCPYKQASQEEGYSTTRLGQWDKFEDSYKVMIFSNGDKCWNGPDRSLKVKLKCGLKNEITDVDEPSRCEYVAVLSTPALCQEEKLKELQQKLEAMSKEQPQAHDEL 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01796 639 MobiDBLite consensus disorder prediction 202 273 - -
Bva06g01796 639 ProSiteProfiles MRH domain profile. 520 615 IPR044865 -
Bva06g01796 639 SUPERFAMILY Mannose 6-phosphate receptor domain 524 613 IPR009011 -
Bva06g01796 639 MobiDBLite consensus disorder prediction 371 400 - -
Bva06g01796 639 Coils Coil 611 638 - -
Bva06g01796 639 MobiDBLite consensus disorder prediction 401 417 - -
Bva06g01796 639 Pfam Glucosidase II beta subunit-like 27 167 IPR028146 -
Bva06g01796 639 Pfam Glucosidase II beta subunit-like protein 481 638 IPR036607 -
Bva06g01796 639 CDD LDLa 85 120 IPR002172 GO:0005515
Bva06g01796 639 MobiDBLite consensus disorder prediction 291 334 - -
Bva06g01796 639 Coils Coil 160 227 - -
Bva06g01796 639 MobiDBLite consensus disorder prediction 291 447 - -
Bva06g01796 639 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 13 639 IPR039794 -
Bva06g01796 639 MobiDBLite consensus disorder prediction 430 447 - -
Bva06g01796 639 Coils Coil 281 301 - -
Bva06g01796 639 PANTHER BNACNNG14010D PROTEIN 13 639 - -
Bva06g01796 639 MobiDBLite consensus disorder prediction 202 239 - -
Bva06g01796 639 Gene3D - 515 613 IPR009011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01796 Bva-Chr6 12370992 12378865 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01796 26 639 Calmodulin-binding Proteins AT5G56360 58.599 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01796 K08288 - gmx:100807083 791.956