Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01789 ATGGCTACTTTATTGTCGTGCGGACCCAATATACTAGTCTCTGCTCCTCTCTCGGACCGGACAAGGTCTCTCCTGCATCCACCTCACGCTCCCTGCCATGCTTTTTCCCATTCTAaccaatttcaatttcttcgaGGTTCTCTATCCGTTGCGAGGTCCGGCTTCAAGCCTGATTTCTTCCCGGAACCCGATGGCGCCGGAGAGCTCGTCAGAGACCTCTTCGGTCGCGCCGAGGGCCTTATCTACACAATTGCCGACGCCGCCGTTTCTTATTCCGATACAGTAACAACTACGACCGGACAGAGCAATGATTGGCTTTCGGGAATTACAAGTTATATGGAGAGTATCCTCaaggtCCTCAAGGATGGTCTTTCTACTTTGCATGTATCATATGCTTATGGTTTTGCAATTATTCTTCTCACGGTTCTTGTTAAGGCTGCCACATTTCCGTTGACAAAGAAACAGGTAGAATCTTCCATGGCTATGCGTTCTTTACAACCTCAAATAAAGGCAATTCAACAACAGTATGCAGGTGATCAGGAGAGAATTCAACTTGAAACTGCTCGATTGTATAAATTGGCTGGAATAAATCCTCTGGCAGGTTGCCTGCCTACACTTGCGACAATACCTGTTTGGATTGGGCTATATAGAGCCCTTTCAAATGTGGCAGATGAGGGACTCCTTACAGAAGGCTTCTTCTGGATACCTTCTCTTGCTGGTCCAACTACAATTGCAGCTCGTCAAAATGGCAGTGGTATCTCTTGGCTTTTCCCGTTTGTGgaTGGTCACCCACCACTCGGTTGGTCAGATACATTGGCATACCTTGTATTGCCTTTGTTGCTGATTGTATCTCAGTACATCTCTGTCCAAATAATGCAGTCAACACAGGCCAATGATCCCAACATGAAGAGTTCTCAAGCCCTAACCAAGCTTCTTCCATTAATGATTGGTTATTTTGCTCTTTCAGTTCCTTCTGGTCTTAGTCTCTACTGGctcacaaataatatattgagtACTGCACAACAAGTTTGGCTTCAAAAGTTTGGGGGCGCTAAAAATCCAATGGGGCAAGCCCATGATGATTTTATGAAGGTTGATCCCATGCCGTTTCAGAAGTCAGTCTCTGAACTGAATCCGACAAAGGAGGCCAGGGAAGGTGAGAAGTTCACATCAGACAAGCCAGGTCCTGGTGAAAGATTTAAGCAAATAAAGGAGCAGGAAGCAAGAAGAAGACggcagaaagaagaaaataggaaAGCTGAGATGGCGGTAGCTAAAGGAACTGTGGCTGAAGATAATTTGGTTGTTGAAAACCCACAAGCTATTAATGCCGACACTTCTGCAGTTGCTGTAAATGGCCAAACTTCGGACTTGGAAAGAAATTGGAGTGCCACATCTGCatttgagagagaaaacaaGGAAGTTTCTGGTCGTTCCCAGATTGATGAAAAAAGTGAGAAGCATTCCAATGGAAGTCTAGAAAAGGAAGCAGAGTA 1496 0.4325 MATLLSCGPNILVSAPLSDRTRSLLHPPHAPCHAFSHSNQFQFLRGSLSVARSGFKPDFFPEPDGAGELVRDLFGRAEGLIYTIADAAVSYSDTVTTTTGQSNDWLSGITSYMESILKVLKDGLSTLHVSYAYGFAIILLTVLVKAATFPLTKKQVESSMAMRSLQPQIKAIQQQYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTLAYLVLPLLLIVSQYISVQIMQSTQANDPNMKSSQALTKLLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKFGGAKNPMGQAHDDFMKVDPMPFQKSVSELNPTKEAREGEKFTSDKPGPGERFKQIKEQEARRRRQKEENRKAEMAVAKGTVAEDNLVVENPQAINADTSAVAVNGQTSDLERNWSATSAFERENKEVSGRSQIDEKSEKHSNGSLEKEAE 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01789 498 Coils Coil 403 423 - -
Bva06g01789 498 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 133 347 IPR028055 -
Bva06g01789 498 MobiDBLite consensus disorder prediction 378 422 - -
Bva06g01789 498 Pfam 60Kd inner membrane protein 133 347 IPR001708 GO:0016021|GO:0032977
Bva06g01789 498 MobiDBLite consensus disorder prediction 464 498 - -
Bva06g01789 498 MobiDBLite consensus disorder prediction 375 424 - -
Bva06g01789 498 MobiDBLite consensus disorder prediction 455 498 - -
Bva06g01789 498 PANTHER BNAA09G28180D PROTEIN 76 456 - -
Bva06g01789 498 PANTHER OXA1 76 456 IPR001708 GO:0016021|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01789 Bva-Chr6 12334429 12339145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01789 73 429 Chloroplast and Mitochondria Gene Families AT2G28800 55.402 1.42e-129 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01789 K03217 - gmx:100802546 655.21