Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01780 atggatttattttctttgctcgtggtcatattttctctcttagcAGTAGCACCATCTGCGGTTTGCCAACTTCAAGAGTTTGTCAGCATAGACTGCGGAGGGACGAGTAATTATACTGATAGAAGCACGGGGCTGGTATGGATTTCAGACTCTGGAATCATGAAACATGGCCATACAGTGGGAGTAGAAAATCCAAATGGAAACAGAGTGCAGTATCAAAGACGCCGAGACTTTCCCATAGACACCAAGAAATACTGTTACACTCTAAGCACCCAAGAGAGGAGAAGATATCTTGTAAGAGCTACTTTTCAGTATGGGAGCTCGGAAAATGGAGACACTTACCCTCAGTTTCAGCTCTACTTGGATGCAACTAAATGGGCTACTGTGTCAATATTGGATGCTTCGAGAGTATATGTAAAGGAAATGATCATCCGGGCACCCTCGAGTTCTATAAGTGTGTGCATGTGTTGCGCTACAACTGGTTCTCCCTTCATATCCACTCTCGAGCTGCGACCCTTGAATCTTTCCATGTATGCCACAGATTACGAGGacaatttcttcttaaaattaGCTGCAAGAGTCAATTTTGGTGCTCCAAGCGAGGATACAATCAGgTACCCAGATGATCCGTATGATAGATTTTGGGAGTCGGATCTTATAAGAAGGCAAAATTATCTAGTTGGGGTGGCCCAAGGCACAGAAAGAATTAATACGACAAAGAACATAGCAATAGGGACAAGAGAATACCCGCCTGTCAAAGTTATGCAAACAGCGGTTGTTGGCACAAAAGGAGTACTCAGCTATAGATTGAACCTTGAAGATTTCCCTGCCAATGCTCGAGCTTATGCATACTTTGCTGAGATTGAAGATCTGGGAAAGAATGAAACTCGAAAATTCAAATTGCAGCAACCTTATATAGCTGACTACAGCAATGCAGTGGTTAACATAGCTGAGAATGCCAACGGGAGCTACACTCTTTATGAACCTAGTTACATGAATGTGACTCTGGAATTTGTTCTATCATTCTCCTTTGTTAGGACCCGGGATTCTACCCGTGGACCACTTTTAAATGCAATGGAAATAAGTAAATATGTACAGATTGCTCCAAAGACTGACAAGCAAGATTCGGCTGTTGCCAGTGCACTCAGCTTTATGTCTGCTGAAAGTGTTCAGATGAATGAAGGTGATCCTTGTGTTCCAACACCCTGGGAATGGCTGAACTGTAGTTCCACCTCTCCATCCAGAATCACAAAAATTAACCTGTCAAGGAGGAATTTGAAGGGTGAAATCCCACCTGAGCTCAACAACATGGAAGAATTGATGGAGTTGTGGTTAGATGGCAACTTTCTTACAGGACCACTACCTGACATGAGCAATCTTGTCAATCTAAAGATTGTGCATCTAGAGAACAACAAATTGACTGGTCCACTACCATCTTACCTGGGTAGTTTGCCAAGCTTGCAAGCGCTGTTCTTACAGAATAACTCGTTTACTGGAGAGATACCTTCAAGATTAGCATctggaaaaatcattttcaaCTATGACGGTAATCCTGGACTGCACAAAGGGAACAAGAAGCATTTTACGTTGATACTGGGAATTTCAATTGGAGTACTTGTAGCTCTATCGATATCATTCATTGGAAGTTTGGTGCTATTGAATAATCTTCGGAGAAAGAAATCTCAGCAAAAAAGTGATGAAAAGGGTATTTCTGGACGCACTGGCAGCAAACCTTTAACTGCGGACTCATTTGTTCAGGGTGGCTATTTAATGGATGAAGGTACAGCTTACTATATTACACTCTCAGAGTTGAAAGAAGCTacaaatcatttttcaaagaaaataggCAAAGGAAGCTTTGGATCTGTCTACTATGGGAAAATGAGAGATGGAAAAGAGGTGGCAGTTAAGATAATGACCGATTCATCCAGCCAGGGGAACCATCAATTTGTGACTGAGGTAGCCCTCCTGTCAAGAATTCATCACAGAAATTTGGTTCCTTTGATTGGATATTGTGAAGAAGAATGTCAGCATATTCTGGTTTACGAGTATATGCATAACGGCACCTTACGCGATCACATTCATGATTCTGCCGCGCACAAGCAGTTAGACTGGTTAGCTCGTCTTCGTATTGCAGAAGATGCAGCTAAAGGTCTTGATTACTTACACACGGGATGCATTCCTAGTATCATTCACCGAGATGTTAAGACAAGCAATATTCTCTTAGACATCAACATGAGAGCAAAAGTGTCAGATTTTGGACTGTCAAGAATAGCCGAAGAAGATTTAACCCATATATCAAGTGTTGCACGAGGAACTGTAGGCTACTTAGATCCTGAgTACTATGCAAATCAGCAACTGACAGAAAAAAGcgatgtttatagttttggcGTTGTTCTTCTAGAACTTATATCCGGTAAAAAGCCTGTATCATCAGAAGATTATGGTCCCGAAATGAATATCGTCCACTGGGGAAGGTGCTTGATTCGCAAAGGGGACGTGATGAGCATCACGGATCAGTGTCTAATTGGAAAAGTGAAAAGTGAATCTGTGTGGAGAGTTGCTGAAATTGCCATGCAATGCGTAGAACAACACGGGGCGTGCAGGCCAAGGATGCAAGAAATTGTTTTGGCTATACAAGATgcaatcaaaattgaaaagggaACAGAAAATAAGCTACAAGTATCATCGTCGTCGTCAGGTTCAAAAGCACAATCTTCGCGAAAAACTTTACTCACAAGCTTCCTTGAAATTGAGAGTCCCGACTTGTGTCTTCCTTCAGCCAGATA 2789 0.4023 MDLFSLLVVIFSLLAVAPSAVCQLQEFVSIDCGGTSNYTDRSTGLVWISDSGIMKHGHTVGVENPNGNRVQYQRRRDFPIDTKKYCYTLSTQERRRYLVRATFQYGSSENGDTYPQFQLYLDATKWATVSILDASRVYVKEMIIRAPSSSISVCMCCATTGSPFISTLELRPLNLSMYATDYEDNFFLKLAARVNFGAPSEDTIRYPDDPYDRFWESDLIRRQNYLVGVAQGTERINTTKNIAIGTREYPPVKVMQTAVVGTKGVLSYRLNLEDFPANARAYAYFAEIEDLGKNETRKFKLQQPYIADYSNAVVNIAENANGSYTLYEPSYMNVTLEFVLSFSFVRTRDSTRGPLLNAMEISKYVQIAPKTDKQDSAVASALSFMSAESVQMNEGDPCVPTPWEWLNCSSTSPSRITKINLSRRNLKGEIPPELNNMEELMELWLDGNFLTGPLPDMSNLVNLKIVHLENNKLTGPLPSYLGSLPSLQALFLQNNSFTGEIPSRLASGKIIFNYDGNPGLHKGNKKHFTLILGISIGVLVALSISFIGSLVLLNNLRRKKSQQKSDEKGISGRTGSKPLTADSFVQGGYLMDEGTAYYITLSELKEATNHFSKKIGKGSFGSVYYGKMRDGKEVAVKIMTDSSSQGNHQFVTEVALLSRIHHRNLVPLIGYCEEECQHILVYEYMHNGTLRDHIHDSAAHKQLDWLARLRIAEDAAKGLDYLHTGCIPSIIHRDVKTSNILLDINMRAKVSDFGLSRIAEEDLTHISSVARGTVGYLDPEYYANQQLTEKSDVYSFGVVLLELISGKKPVSSEDYGPEMNIVHWGRCLIRKGDVMSITDQCLIGKVKSESVWRVAEIAMQCVEQHGACRPRMQEIVLAIQDAIKIEKGTENKLQVSSSSSGSKAQSSRKTLLTSFLEIESPDLCLPSAR 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01780 929 Gene3D Transferase(Phosphotransferase) domain 1 685 904 - -
Bva06g01780 929 ProSiteProfiles Protein kinase domain profile. 609 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01780 929 PANTHER - 21 896 - -
Bva06g01780 929 CDD STKc_IRAK 615 876 - -
Bva06g01780 929 Gene3D Ribonuclease Inhibitor 372 515 IPR032675 -
Bva06g01780 929 ProSitePatterns Serine/Threonine protein kinases active-site signature. 730 742 IPR008271 GO:0004672|GO:0006468
Bva06g01780 929 PANTHER OS07G0107800 PROTEIN-RELATED 21 896 - -
Bva06g01780 929 ProSitePatterns Protein kinases ATP-binding region signature. 615 637 IPR017441 GO:0005524
Bva06g01780 929 SUPERFAMILY L domain-like 400 506 - -
Bva06g01780 929 SUPERFAMILY Protein kinase-like (PK-like) 595 877 IPR011009 -
Bva06g01780 929 Pfam Protein tyrosine and serine/threonine kinase 610 876 IPR001245 GO:0004672|GO:0006468
Bva06g01780 929 SMART serkin_6 609 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01780 929 Gene3D Phosphorylase Kinase; domain 1 589 684 - -
Bva06g01780 929 Pfam Malectin-like domain 30 363 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01780 Bva-Chr6 12301934 12307381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01780 12 929 Receptor kinase-like Gene Family AT1G67720 70.130 0.0 1290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Bva06g01780 Malectin_like 7.2e-89 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01780 - - gmx:100807148 1524.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01780 06 12301934 12307381 Bva06g01780 06 12301934 12307381 ECH