Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01779 ATGGACAATGGTTTCTCTTCTCCTCGACGCGATGCTTTCCCTGCTGGTCTCCGGGTTCTCGTAGTTGACGACGACCCGACATGGCTTAGGATCCTTGAAAAGATGCTCAAGAAGTGCTCTTACGAAGTGACTACATGTTGTTTAGCAAGAGAGGCTCTAAACTTGCTTCGCGAAAGGAAAGATGGGTATGACATTGTGATCAGTGATGTAAACATGCCTGATATGGATGGCTTTAAACTTCTCGAGCATGTTGGACTTGAGATGGATCTTCCAGTCATTATGATGTCTGTTGATGGAGAAACGAGTAGGGTTATGAAAGGTGTTCAACATGGAGCATGTGATTATCTCCTTAAACCTATAAGAATGAAAGAACTTCGAAACATATGGCAACATGTCTTTAGGAAAAGGATACACGAGGCAAGAGAATTTGAAAGTCTTGATGGCTTCGAAGGCATTCTCTTGATGAGAAATGGATCAGATCAGTCTGATGATGGCAATTTGTTCGCTCTGGAAGATATGACCtccataaagaaaagaaaagatgtagATAATAAACATGATGACAGAGAATATGGAGATCCATCTTCGACAAAGAAAGCTAGAGTAGTTTGGTCTGTGGACCTCCACCAGAAATTTGTCAAAGCTGTCAATCAAATAGGATTTGATaAAGTTGGTCCAAAGAAAATACTCGATTTGATGAATGTTCCGTGGCTGACTAGAGAAAATGTTGCCAGCCATTTGCAGAAATATCGGCTCTACTTGAGCAGGttgcaaaaggaaaatgatcaGAAATCTTCGTCATGTGGGGTGAAACTTTCAGATTTACCATCGAAAGATCCTCCAGGAAGTGTTGGTTTTCAGAACCTGATAAACAGGCAACAAAATGATGTTAAGCTTGATGTCTTCAAATTCTCAGAAGGTACAGTGCAGCCTCAGAATGTGGATCCTAAAAGTCATGACAGTGATCTGAAGGTAATTTCAGAGTCCACgagtgaaaaaagaagagcttTGACCAATAAGATtcctgataaaaaaataaggaggAGTTCAGAGATGGGTGTTAATCATTCTCATATACCTTCGGAATCAGAAGCTAATCGTCAGGTATTTGGTTGCACCATCTCAACTCAATACCCTTGGAGTGAAGTTCCAGAAATGCAACTCAAGCAAGAAAACAAGtcatttcttcatttagaAGATAGCTTCAGCCAGTTGCCACTACACGGTACGCAGCATCACATCCAGGTTAATCAATCGCAATCAATTAGTTCCAATCACTCTATTTCAGAGGGAGAAATTGCTGGCTGTATTGAAACTAAGCCTTTGTATGCTGATGACAAGAGTGATTATACCAGTTCTGGGAGTTCAACAGGGAGAGCAATTGACGCCTTTTCTGTTCAACCCAAGAGCCATGGTCAATCTTTAGAGCCCATTCACAATACGAATTGCATTCCTGATCCAGAATTTCACCAAAGAAACGTTCTTTTGGGAGATGAGGTAGCTTCTGCACCTTTGGACGAGGACTTGCACTTGTATTGGCTAGAAGGTGAATGTTATAACATGAACTTGGGGCTGCAGATGTCAGAGTATTATGATCCAGCACTAATTTCAGAAACTCCATTTCACTTGTATGATTCAGCAGACTATTCAGTCGTAGATCAAGGCCTTTTTATAGCATG 1679 0.3907 MDNGFSSPRRDAFPAGLRVLVVDDDPTWLRILEKMLKKCSYEVTTCCLAREALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKRIHEAREFESLDGFEGILLMRNGSDQSDDGNLFALEDMTSIKKRKDVDNKHDDREYGDPSSTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLSRLQKENDQKSSSCGVKLSDLPSKDPPGSVGFQNLINRQQNDVKLDVFKFSEGTVQPQNVDPKSHDSDLKVISESTSEKRRALTNKIPDKKIRRSSEMGVNHSHIPSESEANRQVFGCTISTQYPWSEVPEMQLKQENKSFLHLEDSFSQLPLHGTQHHIQVNQSQSISSNHSISEGEIAGCIETKPLYADDKSDYTSSGSSTGRAIDAFSVQPKSHGQSLEPIHNTNCIPDPEFHQRNVLLGDEVASAPLDEDLHLYWLEGECYNMNLGLQMSEYYDPALISETPFHLYDSADYSVVDQGLFIA 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01779 559 CDD REC_typeB_ARR-like 19 133 - -
Bva06g01779 559 Pfam Response regulator receiver domain 19 128 IPR001789 GO:0000160
Bva06g01779 559 ProSiteProfiles Response regulatory domain profile. 18 133 IPR001789 GO:0000160
Bva06g01779 559 Pfam Myb-like DNA-binding domain 201 251 IPR001005 -
Bva06g01779 559 SMART REC_2 17 129 IPR001789 GO:0000160
Bva06g01779 559 Gene3D - 17 181 - -
Bva06g01779 559 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 199 252 IPR006447 GO:0003677
Bva06g01779 559 SUPERFAMILY CheY-like 16 143 IPR011006 -
Bva06g01779 559 SUPERFAMILY Homeodomain-like 197 256 IPR009057 -
Bva06g01779 559 PANTHER TWO-COMPONENT RESPONSE REGULATOR 6 536 IPR045279 GO:0009736
Bva06g01779 559 PANTHER TWO-COMPONENT RESPONSE REGULATOR 6 536 - -
Bva06g01779 559 Gene3D - 195 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01779 Bva-Chr6 12295911 12299347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01779 11 265 Response Regulator Gene Family AT2G25180 55.472 6.24e-83 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Bva06g01779 Response_reg 7.6e-25 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01779 - K14491 gmx:100797421 769.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01779 06 12295911 12299347 Bva06g01779 06 12295911 12299347 ECH