Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01770 ATGTATCTATCAGAAAAGCCTCGTCCTATCGATTTCTACAAAGAAGAAGGTAGCCGAGACATGATGATCGAAGTTGTCTCAAATGGCGAGCTAGGACCACCGCACCAACAAGCTGCGCAGCATCAAATGATCCTCGGTGATAGCAGCGGTGAAGACCATGAGGTTGAGATTAAGGCACCCAAGAAGCGTGCTGAAACTTGGGTGCAGGACGAAACACGAAGCTTGATTGCCCTTCGTCGCGAGATGGATGGTCTATTTAACACTTCTAAATCCAACAAACACTTGTGGGAACAAATATCAGCTAAGATGAGAGAGAAGGGATTCGATCGCTCCCCAACTATGTGCACAGATAAATGGAGAAATTTGTTAAAGGAGTTCAAGAAGGCTAAGCACCAAGATAAGGGAAGTGGGTCTGCCAAGATGTCTTATTACAAGGAGATTGAGGAGATTCTCCGAGAGAGGAGTAAGAGTGTGCAGTACAAGAGCCCTACTCCCCCAAAGGTTGATCCCTATATGCAATTCGCGGATAAAGGTATTGAGGATACCAGCATCGTTTTTGGGCCAGTTGAAGCTACTGGGAGACCAACCCTCAATCTTGAGAGACGTCTTGATCATGATGGACATCCTCTTGCCATCACTACAGCTGATGCTGTTGCAGCGAGTGGAGTTCCTCCTTGGAATTGGAGGGAAACCCCTGGAAGTGGCGGGGAGGGTCAGTCATGTTGTGGGAGGGTTATATCAGTCAAATGGGGTAATTATACGCGGAGAATAGGCATTGATGGCACTTCAGAAGCCATCAAGGAGGCAATAAGGGTTGCTTTTAGGTTGAGAACCAAGCGTGCATTTTGGTTGGAGGATGAAGACCAGATAATCAGAAGTTTTGACCGTGACATGCCTTTAGGAAATTACACTCTTCACCTTGATGAAGGAATGGCCATTAAGGTATGTCTTTATGATGAGTCTGACCACATCCCTATGCATACTGAAGACAAGATTTTTTACACTGAAGATGATTACCGTGATTTTCTCACGCGCCGGGGCTGGACATGTCTCAGGGAATTTGATGGCTATAGAAACATTGATAACATGGATGATCTTCGACCTGGTGCCGTATACCGTGGTGTGACTTG 1130 0.4619 MYLSEKPRPIDFYKEEGSRDMMIEVVSNGELGPPHQQAAQHQMILGDSSGEDHEVEIKAPKKRAETWVQDETRSLIALRREMDGLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDKGSGSAKMSYYKEIEEILRERSKSVQYKSPTPPKVDPYMQFADKGIEDTSIVFGPVEATGRPTLNLERRLDHDGHPLAITTADAVAASGVPPWNWRETPGSGGEGQSCCGRVISVKWGNYTRRIGIDGTSEAIKEAIRVAFRLRTKRAFWLEDEDQIIRSFDRDMPLGNYTLHLDEGMAIKVCLYDESDHIPMHTEDKIFYTEDDYRDFLTRRGWTCLREFDGYRNIDNMDDLRPGAVYRGVT 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01770 376 Pfam Myb/SANT-like DNA-binding domain 66 150 IPR044822 -
Bva06g01770 376 ProSiteProfiles Myb-like domain profile. 59 123 IPR001005 -
Bva06g01770 376 Gene3D - 67 129 - -
Bva06g01770 376 CDD GT1 65 130 - -
Bva06g01770 376 PANTHER - 5 375 - -
Bva06g01770 376 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-4 5 375 - -
Bva06g01770 376 SMART sant 63 125 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01770 Bva-Chr6 12249640 12254369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01770 1 375 Trihelix Transcription Factor Family AT3G25990 69.072 0.0 524
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva06g01770 Myb_DNA-bind_4 6.4e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01770 - - ccaj:109807736 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01770 06 12249640 12254369 Bva06g01770 06 12249640 12254369 ECH