Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01759 ATGGCGGCTGGTAGACATGGGGGTTATCGCGAAAACGAGTTTAGGAACCGCGAGTCCAATTTTGATGCTTCAAGGCGGGGGTTCACTAATTCTAAGGAAGAGTATGATCATATAAGGAATGGTAACCGTGATGGTCTGAGAGGTCGGAACAGCGATGTCAGAGATAGGTTTAGAGTGAGACAGAAGGATATTAGGGAAAGAGAAGTGTCAAATGGTGGTTATCGGTCATCATCAAGTCGGAGTGACTCGGGGAGCAGCGGTGGTCTTGGTCCCAGACGTTCTGGTCTTCCTGTTAAGACAATGGATAGAGAGCCGGGTGAGTTGTCTAGTGAGAGTGGGTCTGATGATGCTATTGACTCAGAATCACAGGTGAAAGGCGGGGAGGTTGTAAAGGTTGAAGAAAATGGGACCCGATCTCCACCAGAGAGGAAACGAAAATTTTCCCCAATAGTGTGGGATCAGGATGACAACGAAGTGAATAATTCACCTGAAGTTAGGACTGCTACAACAGTGGCTTCTCTGCCTCCGCCACCTCCACTACCAAAAGCATTCCATCAGTCAACCAATGCTCCATGTGGTGGAGTTGAAATACATCCAATCGGGAACAGAGAAACTGAGAGTCCTGAGATGCAGATACTGGCGAAGCCTCCTGTTCCTTCTGAGTCAGAGTCTCCTGTTGAATTGCCTTCCTTGTCTACAGAGCAGAGGTGGGGTAATGTTCAGGATGCTGATCAGCCAGAAGGTGAAGATTATGTTCCAACACGTAATATATCATCCTCAAGATGGGCTGCTGGAGATAACTCTCCAGGTGACGAAGGTGAAATCATAGATGATGAGGAAATGCCTAAAAGGAGGAGGAAGATATCTCCTGAGTTATTGGACACTAGAGTAAGAAACAAGCTATTGAGCCCCGAGGAGTCTAAAAAAGAAGGATTTGAAGGGACTCGAGTTAAATCATCTGAATCTGAAGAAAGAGGGAACCGTAGTAGAACATCTAGTGGGGATGATGTTCCTGATGTTGAATTGGAGAAGGATGACTATATGGAGGTTGATGGTCAAGATGGCAAAAGTGATACTAGTATTAGCCACTCAGACACAGGttctgaagatgaagatgaatatGATAACAGGGAGACTCCAGAGCCCTCAGCTCCCCAACAAAGacttgtcaacatgcttcAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTAAACAAGATAGATGAGGGAACATATGGTGTTGTATATAGGGCTAGAGATAAAAAGACGGGGGAAATTGTGGCATTGAAGAAGGTGAAGatggagaaggaaaaagaaggcTTTCCCTTAACTTCTCTTAGGGaaataaatattcttctttcttttcaccaCCCATCCGTAGTTGATGTTAAGGAAGTAGTTGTAGGAAGTAGCCTTGATAGTATTTTCATGGTGATGGAGTACATGGAACATGACCTGAAGGGATTAATGGAGGCAATGAAACAGCCATTTAGTCAGAGTGAAGTGAAGTGTTTAATGCTTCAGCTTTTAGAAGGTGTGAAGTATCTTCATGACAACTGGGTGCTTCATAGGGATTTGAAGACTTCAAACCTGCTTCTAAATAATAGGGGTGAGTTGAAAATTTGTGACTTTGGGTTGGCTCGTCAGTATGGGAGTCCGCTGAAACCATATACACACATGGTGGTTACTCTGTGGTACAGGGCACCTGAACTACTATTGGGGGCAAAACTGTATTCGACAGCTATTGACATGTGGTCACTAGGTTGTATAATGGCTGAACTATTGTCCAAGGAACCACTATTCAATGGGAAGACAGAATTTGATCAGCTAGACAAGATTTTCAGGACTCTTGGTACACCAAATGAAACAATTTGGCCAGGGTTCTCCAAGCTACCTGGAGTGAAGGCTTCCAACTTTGGGTGGTTCTGGTATAACCTTCTGCGTAAGAAGTTTCCTGCTACTTCATTCACTGGATCTCCAGTTCTCTCTGATTCTGGCTTTGATTTGTTGAACAAGCTTCTTACATATGATCCCGAAAAGCGGATCACAGCTGAAGCTGCTCTTAATCATGAGTGGTTCCGGGAAGTTCCTCTCCCTAAGTCCAAAGAATTCATGCCTACATTCCCTGCTCAGCATGCCCAAGACAGGCGGATGAGAAGAATCTTAAAGAGTCCAGATCCTCTAGAGGAGCAACGCCGGAAGGAGTTGCAGCAAGGTGGATCTGGGACTGGTGAATGCTACTGGGCACTGCCTGCAGCAAGTTGGTGTGAAGTGGAACAGAGCCTTCTCTGCATTTCATTGATGAACAAATTGACAGTAACATTATTCTTGAAAGTATG 2342 0.4347 MAAGRHGGYRENEFRNRESNFDASRRGFTNSKEEYDHIRNGNRDGLRGRNSDVRDRFRVRQKDIREREVSNGGYRSSSSRSDSGSSGGLGPRRSGLPVKTMDREPGELSSESGSDDAIDSESQVKGGEVVKVEENGTRSPPERKRKFSPIVWDQDDNEVNNSPEVRTATTVASLPPPPPLPKAFHQSTNAPCGGVEIHPIGNRETESPEMQILAKPPVPSESESPVELPSLSTEQRWGNVQDADQPEGEDYVPTRNISSSRWAAGDNSPGDEGEIIDDEEMPKRRRKISPELLDTRVRNKLLSPEESKKEGFEGTRVKSSESEERGNRSRTSSGDDVPDVELEKDDYMEVDGQDGKSDTSISHSDTGSEDEDEYDNRETPEPSAPQQRLVNMLQGCRSVDEFERLNKIDEGTYGVVYRARDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPSVVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHMVVTLWYRAPELLLGAKLYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRTLGTPNETIWPGFSKLPGVKVNFVKHQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEAALNHEWFREVPLPKSKEFMPTFPAQHAQDRRMRRILKSPDPLEEQRRKELQQGGSGTGECYWALPAASWCEVEQSLLCISLMNKLTVTLFLKV 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01759 779 Pfam Protein kinase domain 402 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01759 779 MobiDBLite consensus disorder prediction 126 152 - -
Bva06g01759 779 PANTHER - 116 745 - -
Bva06g01759 779 SMART serkin_6 402 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01759 779 PANTHER CELL DIVISION PROTEIN KINASE 116 745 - -
Bva06g01759 779 MobiDBLite consensus disorder prediction 71 88 - -
Bva06g01759 779 MobiDBLite consensus disorder prediction 277 338 - -
Bva06g01759 779 MobiDBLite consensus disorder prediction 1 387 - -
Bva06g01759 779 CDD STKc_CDC2L1 396 693 IPR045267 GO:0004674|GO:0005524|GO:0006468
Bva06g01759 779 ProSitePatterns Serine/Threonine protein kinases active-site signature. 522 534 IPR008271 GO:0004672|GO:0006468
Bva06g01759 779 Gene3D Phosphorylase Kinase; domain 1 386 484 - -
Bva06g01759 779 MobiDBLite consensus disorder prediction 154 169 - -
Bva06g01759 779 MobiDBLite consensus disorder prediction 349 367 - -
Bva06g01759 779 MobiDBLite consensus disorder prediction 8 70 - -
Bva06g01759 779 ProSiteProfiles Protein kinase domain profile. 402 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01759 779 Gene3D Transferase(Phosphotransferase) domain 1 485 726 - -
Bva06g01759 779 MobiDBLite consensus disorder prediction 225 240 - -
Bva06g01759 779 SUPERFAMILY Protein kinase-like (PK-like) 394 699 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01759 Bva-Chr6 12199036 12204378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01759 393 748 Core Cell Cycle Gene Families AT5G10270 44.792 5.33e-96 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Bva06g01759 Pkinase 3.1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01759 K08818 - gmx:100792524 1119.38