Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01751 ATGGATGTTACAGAGGTTGAGGAAAATCTCTTTGCAGTGAGCGATGCCAAGTTACATGGAGAAATGTGCAAGGCTCTCTCTACTATATATTGTAAAGTATTGTCAATATTTCCATCCTTGGAAGCAGCTAGGCCTAGGAGCAAATCGGGAATTCAGGCATTATGTTCATTGCACGTGGCCTTAGAGAAAGCGAAGAATGTTCTTCAACATTGCTCAGAGTGTAGTAAACTTTACTTGGCTATAACTGGGGATTCCGTTCTTCTGAAATTTGAGAAGGCTAAATCTGCACTTGAAGATAGTCTTAAGCGGGTAGAAGACATTGTTCCACAATCTATTGGTTGTCAGATTCAAGAGATTGTAAATGAACTTAAAAGTTTAGCGTTTGCACTTGACCCATTGGAGAAGCAAATTGGGGACGATTTAATTGCACTACTCCAGCAGGGAAGGAAATTCAGTGATTCTAATGATAGTAGTGAGCTTGAATGTTTTCATCAGGCTGCTACAAGACTTGGAATCACATCTTCTAGATCAGCTCTTACCGAGAGAAGAGCTCTCAAGAAACTCATAGAAAGAGCTCGTAGTGAGGAAGACAAACGGAAGGAATCAATTGTTGCATATCTTTTACATCTTATGAGGAAATATTCCAAGTTATTTAGAAGTGAATTTTCGGATGATAATGATTCACAGGGTTCTGCACCTTGTTCTCCCACTGTGCAGGGATCTATTGAGGATGGTATTCCTGTTGCTCATTGCCATGCCTTTGACAGACAGCTTTCAAAACTTAGTTCCTTTAATTTTAAGCCAAATAGTAGGAAATCAGAGCAGATGCCATTTCCACCTGAAGAGTTGAGGTGCCCAATATCTCTGCAACTTATGTATGATCCCGTTATCATTGCTTCGGGGCAAACATATGAAAGGGTTTGCATAGAGAAATGGTTCAATGATGGGCACAACACCTGCCCAAAGACTCAACAGACACTTACACACCTTTTTTTGACTCCTAATCACTGCGTTAAGGGTCTTGTTACTTGTTGGTGTGAACAGAATGGAGTTCCTGTTCCCGATGGCCCCCCTGAATCGCTTGACCTTAACTACTGGAGATTGGCATTGTCAGAGTCTGAGTCGACAAATTCTAGATCTGTTAACAGTGTCAGTTCTTGCAAGTTGAAGGGTGGCAAAGTAGTTCCTATAGAAGAGAGTGTTATTTCAGAGGAAACTGGAGGAAATGGAATTGAGAGTGTGTCTGCAGAAGAGGAAGATACTGAGCAATATCTTAGTTTTCTGAAAGTCTTGACTGAAAGGAACAATTGGAAGAGAAAATGTAAAGTGGTAGAACAGTTAAGGCTGTTACtaagagatgatgaagaagcTAGGACTTTTATGGGCGCTAATGGATTTGTTGAAGCACTTCTGCAGTTTCTACAATCAGCTGTGCATGAAGGAAATGTGATGGCTCAGGAAAGTGGAGCAATGGCTCTCTTCAACCTTGCTGTGAATAACAACAGAAATAAGGAAATTATGTTAACAAAAGGAGTATTGTCATTGTTGGAGGAAATGGTTTCTAACTCCAGCTCCTGTGGTTGTGCAACGGCCCTGTATCTGAACCTCTCTTGCCTTGAAGAAGCCAAGCCTATAATTGGCATGAGTCAGGCTGTTCACTTCCTAAATCAGATTCTTCAAGCTGACACCGAGCTCCAGTGCAAGCAAGATGCCCTCCATGCACTCTATAATCTCTCCACTGCCCCCTCCAATATTCCAAAGCTTCTTTCGTCTGGCATCATTAATGGCCTTCAATCCCTTCTTTCAGGCCAAGATTGCACGTGGACAGAAAAATGTATAGctgttttgataaatttggcTGCTTCTCAATTGGGGAAGGAGGAAATAATATCAACTCCTGGAGTAATAAGTGCATTGGCTGGGATATTAGACACTGGTGAACTCATAGAGCAGGAGCAGGCCGCCTCTTGTCTCCTAATTTTATGTAAGGGGAATGAGAAATGTAGTCAAATGGTCCTCCAAGAAGGGGTAATACCTGCGTTGATGTCAATTTCAGTTAATGGGACttcaagaggaagagaaaaagctCAGAAACTGTTGATACTGTTCCGAGAGCATCGACAACGAGACCATTCACCTGCTAAGACACGTCAGCGCTCGCCTGAAACTAGTGATACATCTATGCCTCCTTCAGAAACGAAACCGCTATGCAAATCGATATCTAGAAGAAAGATGGGGAAAGCGTTTAGCTTTTTGTGGAAAAGTAAGAGCTATTCTGTTTACCAGTGTTA 2291 0.409 MDVTEVEENLFAVSDAKLHGEMCKALSTIYCKVLSIFPSLEAARPRSKSGIQALCSLHVALEKAKNVLQHCSECSKLYLAITGDSVLLKFEKAKSALEDSLKRVEDIVPQSIGCQIQEIVNELKSLAFALDPLEKQIGDDLIALLQQGRKFSDSNDSSELECFHQAATRLGITSSRSALTERRALKKLIERARSEEDKRKESIVAYLLHLMRKYSKLFRSEFSDDNDSQGSAPCSPTVQGSIEDGIPVAHCHAFDRQLSKLSSFNFKPNSRKSEQMPFPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFNDGHNTCPKTQQTLTHLFLTPNHCVKGLVTCWCEQNGVPVPDGPPESLDLNYWRLALSESESTNSRSVNSVSSCKLKGGKVVPIEESVISEETGGNGIESVSAEEEDTEQYLSFLKVLTERNNWKRKCKVVEQLRLLLRDDEEARTFMGANGFVEALLQFLQSAVHEGNVMAQESGAMALFNLAVNNNRNKEIMLTKGVLSLLEEMVSNSSSCGCATALYLNLSCLEEAKPIIGMSQAVHFLNQILQADTELQCKQDALHALYNLSTAPSNIPKLLSSGIINGLQSLLSGQDCTWTEKCIAVLINLAASQLGKEEIISTPGVISALAGILDTGELIEQEQAASCLLILCKGNEKCSQMVLQEGVIPALMSISVNGTSRGREKAQKLLILFREHRQRDHSPAKTRQRSPETSDTSMPPSETKPLCKSISRRKMGKAFSFLWKSKSYSVYQC 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01751 763 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 279 352 IPR013083 -
Bva06g01751 763 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 465 511 IPR000225 GO:0005515
Bva06g01751 763 Pfam U-box domain 280 349 IPR003613 GO:0004842|GO:0016567
Bva06g01751 763 SUPERFAMILY ARM repeat 427 705 IPR016024 -
Bva06g01751 763 MobiDBLite consensus disorder prediction 708 737 - -
Bva06g01751 763 SMART Ubox_2 282 345 IPR003613 GO:0004842|GO:0016567
Bva06g01751 763 Gene3D - 413 761 IPR011989 -
Bva06g01751 763 CDD RING-Ubox_PUB 283 325 IPR045210 -
Bva06g01751 763 ProSiteProfiles U-box domain profile. 278 352 IPR003613 GO:0004842|GO:0016567
Bva06g01751 763 SUPERFAMILY RING/U-box 276 355 - -
Bva06g01751 763 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 1 755 - -
Bva06g01751 763 MobiDBLite consensus disorder prediction 719 734 - -
Bva06g01751 763 PANTHER U BOX DOMAIN-CONTAINING 1 755 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01751 Bva-Chr6 12162715 12167821 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01751 1 762 U-box Gene Family AT1G24330 68.252 0.0 1055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01751 - - gmx:100804344 1239.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01751 06 12162715 12167821 Bva06g01751 06 12162715 12167821 ECH