Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01738 ATGGCTTCCGCTTGTGCTTCCTCTACCATTGCAGCTGTTGGCATCTCCTCCCCAAGTTCCCAGAAGATTGGAGCATGTTTTTTCAGTGGGAGGAAACTGAAGGTGAATAAGTTTACAGGAGTTGCAGGAGGAGCGCGATCCCTGACTACAGTTTGTGCAGTAGCTGACCCAGACAGACCTCTGTGGTTCCCAGGAAGCACCCCTCCTCCATGGCTTGATGGCAGCCTCCCCGGGGACTTTGGCTTTGATCCTCTTGGTCTTGGATCCGATCCTGAGACCTTGAGATGGAACGTTCAATCTGAGATTGTGCACTGCAGATGGGCAATGCTGGGTGCTGCTGGCATTTTCATCCCTGAATTCCTGACAAAGATTGGTATTCTAAATACCCCATCCTGGTACAGTGCTGGGGAGCTGGAATACTTCACTGACACTACTACCCTCTTCATTGTTGAGCTCATTTTCATTGGGTGGGCTGAGGGTAGACGCTGGGCTGATATCATCAAGCCAGGCTGTGTCAACACAGACCCTATCTTTCCCAACAACAAGCTCACAGGAACCGATGTTGGGTATCCAGGTGGGCTATGGTTTGACCCATTGGGCTGGGGAACTGGTTCTCCTGAGAAGATCAAAGAGCTGAGGACAAAAGAGATCAAGAACGGAAGATTAGCCATGTTGGCTGTCATCGGTGCCTGGTTCCAACACATTTACACTGGCACTGGTCCTATTGACAACCTCTTCGCCCATCTCGCAGATCCTGGCCATGCAACCATTTTTGCTGCTTTTACTCCCAAGTG 794 0.5076 MASACASSTIAAVGISSPSSQKIGACFFSGRKLKVNKFTGVAGGARSLTTVCAVADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIVELIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGTGSPEKIKELRTKEIKNGRLAMLAVIGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01738 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 264 - -
Bva06g01738 264 SUPERFAMILY Chlorophyll a-b binding protein 55 262 - -
Bva06g01738 264 Pfam Chlorophyll A-B binding protein 68 234 IPR022796 -
Bva06g01738 264 Gene3D Chlorophyll a/b binding protein domain 69 254 - -
Bva06g01738 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01738 Bva-Chr6 12086230 12087951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01738 45 264 Chloroplast and Mitochondria Gene Families AT3G61470 88.688 2.35e-146 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01738 K08908 - gmx:100784089 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01738 06 12086230 12087951 Bva06g01738 06 12086230 12087951 ECH