Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01724 ATGTTGTCAGTTGTGGGCTGTGGGCGGAGGCTTCTGCGACCAAGTAACCCTGGATTCACTGGCGCAGCTGTCACAGATAGATTAGAAGGACTCTCACTCTTGTGCGGTCTGAGGCGCCAGCTCAAATCAAAATCCTGGGTCTCGCTCGGCGTTCAGTTGTATAGTTTCGCACTCGAGCGCACACTCCGGTTTCTGAGCGTGGTGGGCTCAGTCGAGTTAGTGCAATTCAAATGCCCTCTCTCCCATTTGTCCACTAGTAGTTTTTGTGACGATAAACAATATACCATGACGCCCGGTTATGATATTGATTCTCTGTATCAAGAAGCTCAAACACGATGGCTGAAGCCAGCAGAAGTGATGTACATTTTACAGAATCATGAAAAATACCAGTTCACCCAAGAGCCCCCTCAAATGCCAACCAGTGGatccttgtttctttttaacaaaagaatcCTCCGTTTTTTCCGTAGAGATGGCCATAATTGGCGGAAAAAAAGAGACGGAAGAACTGTGGGAGAAGCACACGAACGACTTAAGGTTGGAAATGTTGAAGCCTTAAATTGTTACTATGCACATGGCGAGCAGAACCCCAGTTTTCAGAGGCGGAGCTACTGGATGTTGGATCCGGCATACGAGCATATTGTTCTTGTACATTACAGAGAAACAAATGAGGGAAAGCTCAGCTCTGGACCTGGTACACAATTGTCTCCAGGACCCTCTTCTGGATTAAGTCAGAGTCCTAGTTCGTATACTGCCCAGAATCCAGGGTCAACATCCTTGTTTGGTGATTCATATGAACCTTATCAGAGTTTCTCTAGCCCTGGATCAGTTGAAGTGACCTCTAATATATCCATCAAGAACAATGGAATGGATCAGTTGGATGGAACTGATGCAGAATCAGGAATTACTACTGAATTCGAGGTTACTCAAGCTTTGCGCCGACTGGAGGAGCAGTTAAGTTTGAACAAGGACAGCTTTAAAGATATTGCTTCCTTCTCCAGTGAACATGAAAATGTAAATGATTCAAACCCTCATCAAGATAAAAGGGAGTTCAGTGAGCAAAACAAATCTGTAGTTTGCAATGGACCAGATGATCATGGTCAACGTTATGATGGTAATGGATACACTAGCACACAAGgtaaTAGGGGTGAATATTATGAAGAATTACTTGACTGTGATCCCTCTGATGGAAATGACGAGGCTTTATCTTGGAAGGAAGTGCTGGAATCATTTAAGACTTCATCCATGGCCAAGTTACAAGAGAATCATGTATACAAGCCGGATGGAATTGAAGAGCAACTTTCTTCTTTGGGAAGGAGTCCGATGGCTAACCAGCATAACAGTCACTGGCTTAACTCAAACAGTAACAATGCTGAAAACTTTTTCTTCTCACCGCCTCAAGAAATTGGTGGTGTCAAATTTCCTGCATATTCTTCTATGGTCGGAACTCAAGAAACTAATTCTGACTATTATGCAACATTCCTTGACCAACGCGAAATTGGAGTGCCTCTAGATGTAGATTCTACCTTGACTGTTGCACAAAAACAGAAGTTTACTATTAAGGAAGTATCTCCAGAATGGGGTTATGCCACAGAGAGTACAAAGGTTATCATAGTTGGATCTTTTCTCTGCCATTCAAATTCTACATGGGCTTGTATGTTTGGCGATATTGAAGTCCCTGTTGAGATGATTCAGGATGGCGTAATCTGTTGTGAAGCTCCGTCCCACCCTCCTGGAAAGGTTACTCTGTGTATTACTTCTGGGAATCGGGAGTCTTGCAGTGAAGTTAGAGAATTTGAGTATCGCAGTAAGAGTAGTAGTTGTGGTCCTTGCAATTCGGTAGAAGCAGAAGCCACTAGAAGTCCAGAAGAGCTATTATTACTTGTGAGATTTGTGCAGATGCTCCTTTCTGATTCTACTGTAAAGAATGATAGTGTAGAATCTGGAAATCATCTGCTAGGAAAATTGAAAGCTGATGACGATTCATGGAACCATGTTATAGAAGCTCTTCTAGTTGGCAGCGGAACTTCATCTGGTACTGTTGATTGGCTTCTTGAAGAGCTTCTTAAGGATAAGTTGCAACTGTGGCTATCTTCCAGATGCCAAGAAAGAGGTGAAGAGACAAGCTGTTCTTTGTCCAAGAAAGAGCAGGGGATATTACACATGGTTGCTGGGTTGGGATTCGAGTGGGCATTGAACCCTATTGTCAGTTCCGgtgtgaatataaattttcgaGACATCAATGGTTGGACTGCCCTGCACTGGGCTGCACGTTTTGGAAGgGAGAAAATGGTTGCTTCACTCATAGCGTCTGGTGCATCTGCTGGAGCAGTGACAGATCCAAGTGCACAAGATCCAGCTGGTAAAACTGCTGCATCCATTGCAGCCAGTAGTGGGCACAAGGGACTTGCAGGTTATCTGTCAGAGGTAGCTCTAACAAGCCATCTGTCTTCCCTCACACTAGAGGAGAGTGAGCTTTCTAAAGGTTCTGCTGAGCTTCAAGCAGAGTTAACTGTTAGCAGTGTCTCCAAGGAAAAATTTACAGCCAGTGAGGATCAGCTTTCACTCAAAGATACTTTGGCAGCTGTCCGAAATGCTGCTCAGGCAGCTGCACGTATACAGTATGCTTTTCGTGCACATTCTTTTAGAAGacggagagagagagaatctgCTGCCAACGCTGCTGCTGCCTTATCAATTCAGAAGAAATATCGAGGCTGGAAACACCGCAAAGATTTCCTAGCATTGCGCCAGAAAGTTGTGAAGATACAGGCTCATGTGAGGGGTTACCAGGTAAGGAAGCATTACAAGGTAATATGCTGGGCAGTTGGAATCTTGGACAAGGTTGTACTAAGATGGCGGAGAAAAGGAGCTGGTTTACGAGGTTTTCGGCAGGAGATGGAATCTGTTGATGAAAATGAGGATGAAGACATTCTCAAGGTGTTCCGGAAACAGAAGGTGGATGCAGAAATCGAAAATGCTGTTTCACGAGTGCTGTCCATGGTCGACTCTCCAGATGCTCGACAACAATATCATCGCATGCTTGAGAAATATCGTCAAGCCAAGGCTGAACTTGGCAGCGCTAGTCGAGAAGCATCAACGTCCACTTCTAAGGATTCGTCGGCTATGGAAGATGACGATTTGTATCTATTTCCCTCAGAATA 3164 0.4355 MLSVVGCGRRLLRPSNPGFTGAAVTDRLEGLSLLCGLRRQLKSKSWVSLGVQLYSFALERTLRFLSVVGSVELVQFKCPLSHLSTSSFCDDKQYTMTPGYDIDSLYQEAQTRWLKPAEVMYILQNHEKYQFTQEPPQMPTSGSLFLFNKRILRFFRRDGHNWRKKRDGRTVGEAHERLKVGNVEALNCYYAHGEQNPSFQRRSYWMLDPAYEHIVLVHYRETNEGKLSSGPGTQLSPGPSSGLSQSPSSYTAQNPGSTSLFGDSYEPYQSFSSPGSVEVTSNISIKNNGMDQLDGTDAESGITTEFEVTQALRRLEEQLSLNKDSFKDIASFSSEHENVNDSNPHQDKREFSEQNKSVVCNGPDDHGQRYDGNGYTSTQGNRGEYYEELLDCDPSDGNDEALSWKEVLESFKTSSMAKLQENHVYKPDGIEEQLSSLGRSPMANQHNSHWLNSNSNNAENFFFSPPQEIGGVKFPAYSSMVGTQETNSDYYATFLDQREIGVPLDVDSTLTVAQKQKFTIKEVSPEWGYATESTKVIIVGSFLCHSNSTWACMFGDIEVPVEMIQDGVICCEAPSHPPGKVTLCITSGNRESCSEVREFEYRSKSSSCGPCNSVEAEATRSPEELLLLVRFVQMLLSDSTVKNDSVESGNHLLGKLKADDDSWNHVIEALLVGSGTSSGTVDWLLEELLKDKLQLWLSSRCQERGEETSCSLSKKEQGILHMVAGLGFEWALNPIVSSGVNINFRDINGWTALHWAARFGREKMVASLIASGASAGAVTDPSAQDPAGKTAASIAASSGHKGLAGYLSEVALTSHLSSLTLEESELSKGSAELQAELTVSSVSKEKFTASEDQLSLKDTLAAVRNAAQAAARIQYAFRAHSFRRRRERESAANAAAALSIQKKYRGWKHRKDFLALRQKVVKIQAHVRGYQVRKHYKVICWAVGILDKVVLRWRRKGAGLRGFRQEMESVDENEDEDILKVFRKQKVDAEIENAVSRVLSMVDSPDARQQYHRMLEKYRQAKAELGSASREASTSTSKDSSAMEDDDLYLFPSE 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01724 1054 Coils Coil 1011 1031 - -
Bva06g01724 1054 Pfam IQ calmodulin-binding motif 918 937 IPR000048 GO:0005515
Bva06g01724 1054 Pfam IQ calmodulin-binding motif 895 913 IPR000048 GO:0005515
Bva06g01724 1054 SMART CG_1_2 105 223 IPR005559 GO:0003677
Bva06g01724 1054 Gene3D - 893 940 - -
Bva06g01724 1054 ProSiteProfiles Ankyrin repeat region circular profile. 748 774 - -
Bva06g01724 1054 ProSiteProfiles IQ motif profile. 866 895 IPR000048 GO:0005515
Bva06g01724 1054 Pfam CG-1 domain 108 221 IPR005559 GO:0003677
Bva06g01724 1054 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 96 1047 - -
Bva06g01724 1054 Gene3D Immunoglobulins 513 608 IPR013783 -
Bva06g01724 1054 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 4 96 1047 - -
Bva06g01724 1054 ProSiteProfiles IQ motif profile. 916 940 IPR000048 GO:0005515
Bva06g01724 1054 SMART iq_5 892 914 IPR000048 GO:0005515
Bva06g01724 1054 SMART iq_5 915 937 IPR000048 GO:0005515
Bva06g01724 1054 Gene3D - 685 817 IPR036770 -
Bva06g01724 1054 SUPERFAMILY E set domains 519 602 IPR014756 -
Bva06g01724 1054 ProSiteProfiles Ankyrin repeat profile. 748 780 IPR002110 GO:0005515
Bva06g01724 1054 ProSiteProfiles CG-1 DNA-binding domain profile. 102 228 IPR005559 GO:0003677
Bva06g01724 1054 MobiDBLite consensus disorder prediction 334 381 - -
Bva06g01724 1054 SUPERFAMILY Ankyrin repeat 717 809 IPR036770 -
Bva06g01724 1054 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 869 944 IPR027417 -
Bva06g01724 1054 MobiDBLite consensus disorder prediction 226 277 - -
Bva06g01724 1054 MobiDBLite consensus disorder prediction 225 277 - -
Bva06g01724 1054 Pfam IPT/TIG domain 519 601 IPR002909 -
Bva06g01724 1054 SMART ANK_2a 748 777 IPR002110 GO:0005515
Bva06g01724 1054 SMART ANK_2a 787 816 IPR002110 GO:0005515
Bva06g01724 1054 ProSiteProfiles IQ motif profile. 893 922 IPR000048 GO:0005515
Bva06g01724 1054 MobiDBLite consensus disorder prediction 340 354 - -
Bva06g01724 1054 CDD IPT 519 603 - -
Bva06g01724 1054 Pfam Ankyrin repeats (3 copies) 722 808 IPR002110 GO:0005515
Bva06g01724 1054 MobiDBLite consensus disorder prediction 1022 1054 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01724 Bva-Chr6 12020897 12030185 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01724 100 1052 CAMTA Transcription Factor Family AT1G67310 52.363 0.0 929
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Bva06g01724 CG-1 5.8e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01724 K21596 - gmx:100786880 1326.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01724 06 12020897 12030185 Bva06g01724 06 12020897 12030185 ECH