Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01719 ATGTACTGATTCCTTCGGCTTATCTTAAGCACTTCGCCTGAAAGCTGTTCTATAAAAGGGAGTCACTCCGTCAAAAATTTTACCTCTTCTTTCACTCCCGGGTTTCTCCGAGTGTTGATATTGGCAGCAAAAGGGAGCATTAATTTACGAATGGAGTCATCAACATCTGGGTCAATTAAGAGGACTCGGACACCTAATAGTGGATGCTTGGTTGATGGGTGCAATTCAGACCTCAGTAAATGTAGGGACTATCACCGACGCCACAAGGTTTGTGAACTCCACTCCAAGACCCCTAAAGTTACAATAAAAGGTCGGGAACAACGGTTCTGCCAGCAGTGCAGCAGgtTCCATTCACTGGAGGAGTTTGATGAAAGAAAGCGAAGCTGCAGGAAGCGTCTTGATTGGCACAACCGACGCCGAAGAAAACCTCAACCAGAGCCCGTGACTGTCAGTTCAgcaaaatttctttcaagttaCCAAGGACCAGGTGCCAGAGTCTCGGCATTTGATCATCCTCAAATACTAGCAGCAACAGGCCCTGTTGTGAGCTCTGGTCGTACGAAAtctgaaaataatattgtgcTTTTTAATGGCCAGTCACAGTTCGATGACTTGGATGGCAGAAATGTGTCAATGTCTGAATCTTTTAGTTTTTGTGACAAAGGAGAAAGacagttttcatttttacaggGCGTCAATTCTACTGTGAATGGAGGCGGCGGCGGCAGCAGCAGTAGCcagaaattattgtttgatGGTTTACAGTTAAACGGAGATATTGATTCTGAACGTGCTCTCTCTCTTCTGTCACGGACTCCATCTGAGAGTGGGGATTTTGGGTGGAGACACATGATGCATCTAAATGGTAACCCTCCGTCTCCACCGTTTGGCTCTGGTTTAGGAATGGAGAGGGAATCAACTCCACCTCATGTTACCCAAGGTTTAAGCAGCACGTTTAATGTTAATGTTAATGTTACTACTAATGCCAagcttcattttcatattgGGTCTCCAACAGCTGCTCACACTCGACACCAACTCTTTTCGCCGGGGGAATA 1058 0.4272 MYFLRLILSTSPESCSIKGSHSVKNFTSSFTPGFLRVLILAAKGSINLRMESSTSGSIKRTRTPNSGCLVDGCNSDLSKCRDYHRRHKVCELHSKTPKVTIKGREQRFCQQCSRFHSLEEFDERKRSCRKRLDWHNRRRRKPQPEPVTVSSAKFLSSYQGPGARVSAFDHPQILAATGPVVSSGRTKSENNIVLFNGQSQFDDLDGRNVSMSESFSFCDKGERQFSFLQGVNSTVNGGGGGSSSSQKLLFDGLQLNGDIDSERALSLLSRTPSESGDFGWRHMMHLNGNPPSPPFGSGLGMERESTPPHVTQGLSSTFNVNVNVTTNAKLHFHIGSPTAAHTRHQLFSPGE 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01719 351 Gene3D - 60 129 IPR036893 GO:0003677|GO:0005634
Bva06g01719 351 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 13A ISOFORM X1 48 342 - -
Bva06g01719 351 SUPERFAMILY SBT domain 68 147 IPR036893 GO:0003677|GO:0005634
Bva06g01719 351 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 48 342 IPR044817 GO:0003677
Bva06g01719 351 Pfam SBP domain 68 141 IPR004333 GO:0003677
Bva06g01719 351 ProSiteProfiles Zinc finger SBP-type profile. 65 142 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01719 Bva-Chr6 11993124 11996042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01719 68 160 SBP-box Gene Family AT5G50670 73.118 5.86e-44 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bva06g01719 SBP 5.5e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01719 06 11993124 11996042 Bva06g01719 06 11993124 11996042 ECH