Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01718 ATGGAAGTTGTTCGATCTCAGAGTCACAGAAAATTCTCCCCTAATGATGTTGTTACGACTATTCCACTCTATCGCTCTGCTCCACCACTCCAAGTCAGGCTCGAGGATTTTGAGTTATTCGCCATGGATCGCCTTCGAGTTCTTAAGGGGATTTCTGATGCTTTATCTCGAGGAAAGAAGCCGgaagaaatgcaaaaattgGTAAAAGATCTGTGGAAGTCAAATATGAGACATCAACAGGCTTCTGAGGTTGTGAACAAGGATATTATATCTCATTTTGTCCTACGTCTTGTGTATTGCAGAACGGAGGACTTGAGAAAATGGTTTCTTTCAATGGAAACAGCACTGTTTCGCTACCGTTTTCGTCTTGAAAGTGCTGAAGCTCAGAGGGCATTCTTGGTGGAATTTGGCCTTCCTTACAGGACTATTAGCAATGCGGAATTTGAGACTATGAAGGATAAATTGGGACAAGTTGCACGTTCGATCGGTCAACCTTTACCCACTGCCGATGCTATATTCTACCAGGTACCATTTCAAGAAGTTCCAGAGCTTGTAGCTGGTCgtaaagtatttataaatcaaGGCTTTGCTTATGTTGCAATGAATCAGGTGGTTTCATTGCTAGCCCCGCAATTCCGCAGTCACTTATCAAAGGCACTAATCCTTACAAACAGAAAATGGACATCTACAACCAGAGAACAAGAGAAAGATAGGTTAACTCCTATTGTCGAAGCTCTGTGCTCAAGTTATCTAGGCCCCGACTATTCTCAGCCAAGAGAATATGCTGAGATTTCATTAAAGGATATCGATCAAGTTGCGAGGAGATCATTTCCTTTATGCATGCGTCACCTATATGAAAAGCTGAGAGAGGATCATCATTTGAAGCATGGAGGGAGGATGCAACTAGGCCTCTTTCTCAAGGGTGTTGGTTTAAATTTGGATGATGCACTTGCGTTTTGGAGAGCCGAGTTCTCGCACAAGATTGGTTTGGAGAGGTTTGAGAAAGaatatgcatataatataCGCCATAGTTATGGAAAGGAAGGGAAGAGAGCTGATTATACACCCTTTTCTTGCCACAAGATTATCACAACAACTCCTGGCGTTGGAGATCATCATGGGTGCCCTTATCGGCATTTCAGTGAAGAGAATCTGAGAGCTGCTCTAAGCAGAATGGGGGTGAATAGTCGAGCAATGGAAGATGTAATGGACAAAGTGCGAAATAGACATTATCAGTTGGCTTGCACCTTGACATTTGAAGCTCTACATGGCTTGCCGTGTGACGCGGGGATTAACCATCCAAATCAATACTTCAGCGACAGCCAAAAGATATTGCAGCCGAAGAAGGACTCATCAGCATG 1361 0.4232 MEVVRSQSHRKFSPNDVVTTIPLYRSAPPLQVRLEDFELFAMDRLRVLKGISDALSRGKKPEEMQKLVKDLWKSNMRHQQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETALFRYRFRLESAEAQRAFLVEFGLPYRTISNAEFETMKDKLGQVARSIGQPLPTADAIFYQVPFQEVPELVAGRKVFINQGFAYVAMNQVVSLLAPQFRSHLSKALILTNRKWTSTTREQEKDRLTPIVEALCSSYLGPDYSQPREYAEISLKDIDQVARRSFPLCMRHLYEKLREDHHLKHGGRMQLGLFLKGVGLNLDDALAFWRAEFSHKIGLERFEKEYAYNIRHSYGKEGKRADYTPFSCHKIITTTPGVGDHHGCPYRHFSEENLRAALSRMGVNSRAMEDVMDKVRNRHYQLACTLTFEALHGLPCDAGINHPNQYFSDSQKILQPKKDSSA 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01718 453 Pfam Eukaryotic and archaeal DNA primase, large subunit 173 438 IPR007238 GO:0006269
Bva06g01718 453 PANTHER DNA PRIMASE LARGE SUBUNIT 1 449 - -
Bva06g01718 453 Gene3D - 2 246 - -
Bva06g01718 453 PIRSF DNA_primase_large 2 453 IPR016558 -
Bva06g01718 453 PANTHER DNA PRIMASE LARGE SUBUNIT 1 449 IPR007238 GO:0006269
Bva06g01718 453 CDD PriL_PriS_Eukaryotic 23 441 IPR016558 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01718 Bva-Chr6 11985467 11993186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01718 1 448 Core DNA Replication Machinery Family AT1G67320 66.667 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01718 K02685 - gmx:100806321 782.711