Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01715 ATGTTTAGAATTGATGATTTTCGTCGTGACGCCGTCTGTACCTTGGACGACAATGGATACTTCCTTGAGACAATTCACTCAATTTTCAAGCTCGTTCATGACAATGGACTTAAAGCCACTCTACTAGGATTTCTCACAAGCTCCATCAAACTGATCCCTGGCGTGAAGAGTTACATCGATGCTGAAAAACAGAAGGTTGTGGATAAGTTGCAGTCTGATGGTAAATCTAAACGAGAAGGTTGGAGAACAGAGTTACCAGGGGAAGGACTAGGGACAGCAGTCCTTGAAAAATTGAgagatgagaaaagaaatgatgtaACGTGGCAGGGCAAATGCTCTGGGACAGTCTACATTGGAGGCAGCGAATCGGATGGACATTTTTCTCTGATAAATGAAGCATGCTCAATGTTTGCACACACAAATCCCTTGCATTTGGATGTATTCCAGAGTGTTGTACAATTTGAGGCAGAAGTGGTTGCGATGACAGCTGCACTTCTTGGAAGTAAAGAAAAGAGCTCTGGAGGACAAATATGTGGAAACATGACATCAGGAGGAACTGAAAGCATATTATTAGCTGTCAAATCATCTCGTGACTACATGAAATCTAAGAAAGGAATTATAAGACCTGAAATGATAATACCTGTGTCTGCACACTCAGCATACGACAAGGCTGCACAGTATTTTAATATCAAGTTATGGCGTGTCCCAgtgaacaaaaattttcaggCAGACCCGAAAGCAATTCGACGgcatattaacaaaaatactaTCTTGATTGTTGGATCTGCCCCTGGGTTCCCTCATGGAATCATTGACCCCATTGAAGAACTTGGTGTTCTGGCATCTAGGTTTGGAATTTGTCTCCATGTTGATCTTTGTCTCGGGGGCTTTGTATTACCTTTTGCTCGTGAGCTTGGGTATACCATTCCCCCTTTTGATTTTACTGTCAAAGGAGTATCTTCAGTATCAGTGGATGTGCATAAATATGGCTTGGCTCCCAAAGGAACGAGTGTAATTCTATACAGGAATCATGAAATCAGAAAGCATCAATTTGTTGCCGTTACTGAGTGGTCTGGTGGGTTATATGTGTCTCCAACCATTGCTGGAAGTAGGCCTGGAGGTCTCATTGCTggggcatgggcagcaatgatGTCTTTAGGGAAAGAAGGGTACTTGGAGAATACAAAAGCAATTATGGaagtatcaaaaaaaatacagaaaggCATAGAGGAGATTCCTGAGTTGTTTATTATTGGAAAACCGGATATGACAATTGTGGCTTTTGGATCTGATGTTCTGGACATATTTGAAGTCAATGATATCTTGTCATCCAAAGGGTGGCATTTGAATGCTTTGCAAAGACCCAACAGTATCCATATCTGCGTGACCCTGCAGCATGTGGTGGTCGTTGAAGAGTTCCTTGGTGATTTAAGGGAAGCTGTGAAAACTGTGAAAGAAAATCCAGGTCTAATAAGTGGAGGACTAGCACCTATATACGGTGCCGCAGGAAAGATGCCAGATAGAGTCATGGTCCAGGAATTGTTGGTAGATTTCATGGATGATTCAAAATGCACCGTTCTCTTCTCAAACCCGATAGGTCTAAGAAGGGAATTCAGGGATGTTAGGAAAGGAAGGGtcgagaagaagaaaggagaacCAAGAAATCAGAAAGAGATGAGAATATGGGGAATTTCATTCATAGCCTTATCCTTATCAGGTGGGGGTAGCTCTTCATATATACGCAGTTCCCCAGCTTCAGATCGTTACAATCACCAATA 1778 0.3965 MFRIDDFRRDAVCTLDDNGYFLETIHSIFKLVHDNGLKATLLGFLTSSIKLIPGVKSYIDAEKQKVVDKLQSDGKSKREGWRTELPGEGLGTAVLEKLRDEKRNDVTWQGKCSGTVYIGGSESDGHFSLINEACSMFAHTNPLHLDVFQSVVQFEAEVVAMTAALLGSKEKSSGGQICGNMTSGGTESILLAVKSSRDYMKSKKGIIRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVNKNFQADPKAIRRHINKNTILIVGSAPGFPHGIIDPIEELGVLASRFGICLHVDLCLGGFVLPFARELGYTIPPFDFTVKGVSSVSVDVHKYGLAPKGTSVILYRNHEIRKHQFVAVTEWSGGLYVSPTIAGSRPGGLIAGAWAAMMSLGKEGYLENTKAIMEVSKKIQKGIEEIPELFIIGKPDMTIVAFGSDVLDIFEVNDILSSKGWHLNALQRPNSIHICVTLQHVVVVEEFLGDLREAVKTVKENPGLISGGLAPIYGAAGKMPDRVMVQELLVDFMDDSKCTVLFSNPIGLRREFRDVRKGRVEKKKGEPRNQKEMRIWGISFIALSLSGGGSSSYIRSSPASDRYNHQ 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01715 592 Gene3D Aspartate Aminotransferase, domain 1 92 486 IPR015422 GO:0003824
Bva06g01715 592 Pfam Pyridoxal-dependent decarboxylase conserved domain 134 428 IPR002129 GO:0016830|GO:0019752|GO:0030170
Bva06g01715 592 Gene3D - 120 387 IPR015421 GO:0003824
Bva06g01715 592 Gene3D - 84 520 - -
Bva06g01715 592 PANTHER - 25 522 - -
Bva06g01715 592 MobiDBLite consensus disorder prediction 573 592 - -
Bva06g01715 592 SUPERFAMILY PLP-dependent transferases 60 486 IPR015424 -
Bva06g01715 592 PANTHER SPHINGOSINE-1-PHOSPHATE LYASE 1 25 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01715 Bva-Chr6 11965996 11972601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01715 139 479 Calmodulin-binding Proteins AT5G17330 25.208 1.81e-23 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01715 K01634 - gmx:100794395 891.338
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01715 06 11965996 11972601 Bva06g01715 06 11965996 11972601 ECH