Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01710 ATGGCAACGCTTTATCCAACGCATTGCCATTCATACCCCTCAGTGCAGTCGCCGTTGTCCTCATTAAAGTCGTGTTCTTATGCGCCTTCGTTGTCCAAGCTTGGACATCTTCTGCGCATGACCTTCACTTCGGCCTCAAAGCGTTTTCTTGCGGCTAAGGTTTCTCTTCAACAGCAGGACGTTGGAGCCTCAGGGGACCTCGCCAAGAAGAAGATATTTCCAGCCCTTTTCGCACTTTACTATGAGGACTGTCTTCCAAAGCATTTTATCATCTATGGTTATGCTCGAAGTAAGATGACTGATGCAGAACTAAAAAATATGGTTGGCAAGACGCTTACTTGCAGAATTGATATAAGGGAGAACTGCAGTGAGGAGATGGAccaatttcttaaaagatGTTTCTACCATTCAGGTCAATATGATTCTCAGGAAGACTTTGCGGAGCTAGACAAGAAGCTGAAGGAACATGAGGGTGGGAGAATCTCTAATCGCCTGTTTTATCTATCAATTCCTCCTAATATATTCACAAATGCTGTGAAAAGTGCAAGCTTGTCAGCTTCTTCCAGTAATGGTTGGACAAGGGTCATTGTTGAGAAGCCCTTTGGTCGTGATTCAGAATCTTCTGCTGCTTTAACAAGATCACTTAAGCAGTACCTGACAGAGGATCAGATTTTCAGATCTTCGAAGGAGATTCCAGATGCTTATGAGAGGCTCCTTCTAGATGCCATCGAAGGAGAAAGGAGACTGTTTATACGAAGTGATGAACTGGACGCAGCTTGGGCTCTCTTCACGCCCGTGTTGAAGGAGctggaagagaaaaatataattccagAGTACTATCCTTATGGAAGTCGGGGTCCTGTTGGGGCTCACTACCTTGCCGCCGGATACACTCTTTACTATTGGCAAAAAGCATGGAAAAGTCACTCAAATCCAGGTCTCTTGAGGTCATCTAACTTTAATCAAGGAGAGGCCCCATTTCGTCCCTCTGTCTGTTGTAGAATCAAGGGGCTCATATCACCATCGACGAGAGCAAGCACCCTTATTTTTGGGGTCCAGGTCCTTCTCCTAAACATAGAAATGGCAGAGAACAAGTCTGCAGACATCAAGGACTTTCAAATTATGACTGCTAACAAAGAGGAAGATAAGAAACACTTGGCACCAAAGAGAGGTTCCAATAAGGATCGGCACAAAAAGGTTGACGGTAGAGGCAGAAGAATAAGGATGCCAGCTCTATGCGCCGCCAGGGTTTTCCAATTGACAAGAGAATTGGGCCACAAGTCTGATGGCGAAACAATTCAATGGCTTTTGCAGCAAGCAGAACCCTCGATAATTGCAGCAACCGGTACGGGAACTATCCCGGCTTCAGCTCTTGCAGAAGCAGGGGCTTCTGTTTCTGAACAAAGAAGCTCTGTGTCTGCTGGTTTGCACGCAAAGGGGGAATCTTTGGGGTCAAGTCCTAGGTATGACGGTAGGCCCAGCTGGACAAAGATGAACGGAAATCTCGCAAGACCACTCTTACCAGGTGGGATTTGGCCAAATCTTGGAATTGGGTCAGGGATCTTTCAGAACTCGGGGTTTTTGACTTGTAATTCTGCAAACGACCCAAACAACTTGCCTAAATTTGGATTCCCTAGCTTTGAATTTGCTCATGTAAATATGGGTCCAATGAGTTTATCCACAAATTTGGGTGGAGCCGACCAGCAAGTCCCAGGTTTAGAGCTTGGTCTGTCGCAGGACGGTCATATTAGGATGTTAACTTCCGAAGCCATGGCCCAGTTCTACCAGCATCTTGGGCAGGGCAGAGATGGTGCTGGGTTGCTGAGTAGACAAACGGAACCCACCGAGAAGGATAATTCTAGAGgatcaaaacaata 1877 0.4523 MATLYPTHCHSYPSVQSPLSSLKSCSYAPSLSKLGHLLRMTFTSASKRFLAAKVSLQQQDVGASGDLAKKKIFPALFALYYEDCLPKHFIIYGYARSKMTDAELKNMVGKTLTCRIDIRENCSEEMDQFLKRCFYHSGQYDSQEDFAELDKKLKEHEGGRISNRLFYLSIPPNIFTNAVKSASLSASSSNGWTRVIVEKPFGRDSESSAALTRSLKQYLTEDQIFRSSKEIPDAYERLLLDAIEGERRLFIRSDELDAAWALFTPVLKELEEKNIIPEYYPYGSRGPVGAHYLAAGYTLYYWQKAWKSHSNPGLLRSSNFNQGEAPFRPSVCCRIKGLISPSTRASTLIFGVQVLLLNIEMAENKSADIKDFQIMTANKEEDKKHLAPKRGSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAEAGASVSEQRSSVSAGLHAKGESLGSSPRYDGRPSWTKMNGNLARPLLPGGIWPNLGIGSGIFQNSGFLTCNSANDPNNLPKFGFPSFEFAHVNMGPMSLSTNLGGADQQVPGLELGLSQDGHIRMLTSEAMAQFYQHLGQGRDGAGLLSRQTEPTEKDNSRGSKQ 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01710 625 MobiDBLite consensus disorder prediction 602 625 - -
Bva06g01710 625 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 2, CHLOROPLASTIC 227 299 - -
Bva06g01710 625 Gene3D - 61 226 - -
Bva06g01710 625 MobiDBLite consensus disorder prediction 380 398 - -
Bva06g01710 625 Pfam TCP family transcription factor 392 477 IPR017887 -
Bva06g01710 625 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 61 226 IPR022674 GO:0006006|GO:0016614|GO:0050661
Bva06g01710 625 Gene3D - 231 251 - -
Bva06g01710 625 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 227 299 IPR001282 GO:0006006|GO:0016614|GO:0050661
Bva06g01710 625 MobiDBLite consensus disorder prediction 470 492 - -
Bva06g01710 625 MobiDBLite consensus disorder prediction 380 401 - -
Bva06g01710 625 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 227 298 IPR022675 GO:0004345|GO:0006006|GO:0050661
Bva06g01710 625 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 216 302 - -
Bva06g01710 625 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 2, CHLOROPLASTIC 58 226 - -
Bva06g01710 625 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 61 226 IPR036291 -
Bva06g01710 625 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 58 226 IPR001282 GO:0006006|GO:0016614|GO:0050661
Bva06g01710 625 Gene3D Dihydrodipicolinate Reductase; domain 2 228 293 - -
Bva06g01710 625 ProSiteProfiles TCP domain profile. 393 447 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01710 Bva-Chr6 11942273 11947473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01710 363 595 TCP Transcription Factor Family AT3G27010 53.252 2.26e-62 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bva06g01710 G6PD_N 7.4e-47 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01710 - - jre:109018416 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01710 06 11942273 11947473 Bva06g01710 06 11942273 11947473 ECH