Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01708 ATGGCGTGTGCATTTACAACCCTGTCAAATGTCGGGTCATTGCCGAGTCCACGAAACTTCACGACGCAGATAAGAGTTTTTATCCCCACGAGTTGTACTTGTTCAAGAAAGCTCAGGGGATTTTCTTCGCGGTCGAATTTATGCTCCTTATCGAGTGCCTTCTCTGGTTCGTTGTTTCTGGAGTCTTCTACTTGTTTGTCGAATCCTTTCCGGCAAAGAAGGGGGTTTTCTAGCTTGGTCCGGGCCAGCTCTGAGgaAGCACCCTTACAATCGAAAGTTACTCATAAAGTATATTTTGACCTAAGCATTGGAAATCCAGTAGGGAAACTTGCTGGAAGGATTGTGATTGGACTCTATGGTGATGATGTGCCTCAGACGGCGGAGAATTTCCGTGCCCTTTGTACAGGGGAGAAGGGCTTTGGATACAAAGGTTCCGCATTCCATCGTGTGATAAAGGATTTCATGATTCAAGGAGGGGACTTCGACAAAGGAAATGGAACTGGAGGTAAAAGTATATATGGTCGCACTTTCAAAGATGagaattttaagtTGTCTCATATTGGACCAGGAATTGTTAGCATGGCAAATGCCGGGCCCAACACCAATGGAAGTCAGTTTTTCATATGTACTGTCAAGACATCATGGCTGGACCAGAGGCATGTAGTATTTGGCCAAGTTTTAGAAGGCATGGACATTGTTAGGTTGATTGAGTCGCAGGAGACAGACCGTGGTGATCGTCCAAGAAACAAGGTGGTTATCAGTGACTGTGGCGAGCTTCCTATTGCTTG 788 0.4518 MACAFTTLSNVGSLPSPRNFTTQIRVFIPTSCTCSRKLRGFSSRSNLCSLSSAFSGSLFLESSTCLSNPFRQRRGFSSLVRASSEEAPLQSKVTHKVYFDLSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSAFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHIGPGIVSMANAGPNTNGSQFFICTVKTSWLDQRHVVFGQVLEGMDIVRLIESQETDRGDRPRNKVVISDCGELPIA 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01708 262 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 108 258 IPR002130 GO:0000413|GO:0003755
Bva06g01708 262 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 142 159 IPR020892 GO:0003755|GO:0006457
Bva06g01708 262 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 43 259 - -
Bva06g01708 262 Gene3D - 84 262 IPR029000 -
Bva06g01708 262 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 5, CHLOROPLASTIC 43 259 - -
Bva06g01708 262 CDD cyclophilin_ABH_like 95 257 - -
Bva06g01708 262 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 IPR002130 GO:0000413|GO:0003755
Bva06g01708 262 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 218 233 IPR002130 GO:0000413|GO:0003755
Bva06g01708 262 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 190 205 IPR002130 GO:0000413|GO:0003755
Bva06g01708 262 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 147 159 IPR002130 GO:0000413|GO:0003755
Bva06g01708 262 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 205 217 IPR002130 GO:0000413|GO:0003755
Bva06g01708 262 SUPERFAMILY Cyclophilin-like 89 259 IPR029000 -
Bva06g01708 262 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 111 257 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01708 Bva-Chr6 11930447 11933503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01708 112 253 U-box Gene Family AT5G67530 48.951 4.21e-35 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01708 K03768 - zju:107417611 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01708 06 11930447 11933503 Bva06g01708 06 11930447 11933503 ECH