Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01697 ATGATGagtttttttaagaatggCGAGCTTAGGTTGCCCCCTGGATTCCGATTTCACCCCACAGACGAGGAGCTGGTCGTGCAATATTTGAAGCGCAAGGTGTTTTGCTGTCCTCTGCCTGCCTCTATCATTCCTGAGGTTGATGTTTGCAAGTCTGATCCTTGGGATTTGCCAGGTGATTTGGAGCAAGAGAGATACTTCTTCAGCACTAGGGAAGCCAAATATCCCAACGGAAACAGAGGGAAGCCTCCTCACGGCTCCAGAACCGATTGGATCATGCACGAATATCGCCTCCTCACCACCCAAACTGCTGTCCCAACGAAGACTTCGACTCAGAGTTCGGCGATGCCCATGCAAAATTGGGTTCTGTGTCGTATATTTTTGAAGAGAAGAAACggtaaaaatgaagaaggcACATTGGGAGTGGGAGGGAGTAACGAAAAGCACAAGGTCAGCAAGACTAGGCCAGTTTTCTACGACTTCTTGGCACGGAAAGCCAACGGGGACAGGACCGATTTGAATTGTTCGTCCTCGGCCGCTAGTGGAATCACGGTCGTCTCCTCTAGCGAATCCGACGAACACGAAGAAAGTAGTAGTAGTTGCAATACcactttcctttctcttagaagaaaacatta 638 0.4514 MMSFFKNGELRLPPGFRFHPTDEELVVQYLKRKVFCCPLPASIIPEVDVCKSDPWDLPGDLEQERYFFSTREAKYPNGNRGKPPHGSRTDWIMHEYRLLTTQTAVPTKTSTQSSAMPMQNWVLCRIFLKRRNGKNEEGTLGVGGSNEKHKVSKTRPVFYDFLARKANGDRTDLNCSSSAASGITVVSSSESDEHEESSSSCNTTFLSLRRKH 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01697 212 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 80 211 - -
Bva06g01697 212 PANTHER NAC DOMAIN-CONTAINING PROTEIN 83-LIKE 80 211 - -
Bva06g01697 212 ProSiteProfiles NAC domain profile. 12 157 IPR003441 GO:0003677|GO:0006355
Bva06g01697 212 Pfam No apical meristem (NAM) protein 13 81 IPR003441 GO:0003677|GO:0006355
Bva06g01697 212 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 81 - -
Bva06g01697 212 SUPERFAMILY NAC domain 5 129 IPR036093 GO:0003677|GO:0006355
Bva06g01697 212 MobiDBLite consensus disorder prediction 186 212 - -
Bva06g01697 212 PANTHER NAC DOMAIN-CONTAINING PROTEIN 83-LIKE 4 81 - -
Bva06g01697 212 Gene3D NAC domain 81 134 IPR036093 GO:0003677|GO:0006355
Bva06g01697 212 Gene3D NAC domain 21 80 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01697 Bva-Chr6 11890057 11891585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01697 2 203 NAC Transcription Factor Family AT5G13180 48.289 4.85e-67 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva06g01697 NAM 1.4e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01697 - - rcu:8275014 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01697 06 11890057 11891585 Bva06g01697 06 11890057 11891585 ECH
Bva06g01697 06 11890057 11891585 Bva06g01544 06 11078150 11079564 ECH
Bva06g01697 06 11890057 11891585 Bva03g00256 03 1558723 1560110 ECH
Bva06g01697 06 11890057 11891585 Bva04g01883 04 19276225 19277599 ECH