Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01688 ATGTCGAAAGACACCATTGAGTTTGATTTCTTGGGAATCCAGAAAGAGGCTTCCAAATCCAGGTTCCGAAAAAACTTTCGCGTGGCAGGAATGCAGAGCGCCATTTCCAGAATGGATCCTGCTCCTGCTCAGGGGATGAGTGAGGTTAATCCTCTACAAACAACTCCTTTCACCATATTCTACAACGGAGGCGTCGCCGTTTTCGATTTGCCCAGACATCAGGCAGAGAATATCTTAAAACTTGCGGAGCAAGTTTGCTCCAAAGGGAGAGATCCTGTCGGGAATACCAAGTCTGGATTGCAAACAAGCTCCGCCGACCAGCTCTTGGATACTCTTAATGCAGATCTTCCACTTGCCCGCAAGAAGTCTTTGCAAAGATTCTTAGAGAAGCGTAAAGAGAGATTGACAAGCGTATCATGTTA 422 0.4645 MSKDTIEFDFLGIQKEASKSRFRKNFRVAGMQSAISRMDPAPAQGMSEVNPLQTTPFTIFYNGGVAVFDLPRHQAENILKLAEQVCSKGRDPVGNTKSGLQTSSADQLLDTLNADLPLARKKSLQRFLEKRKERLTSVSC 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01688 140 Pfam tify domain 53 82 IPR010399 -
Bva06g01688 140 ProSiteProfiles Tify domain profile. 50 84 IPR010399 -
Bva06g01688 140 SMART tify_2 50 84 IPR010399 -
Bva06g01688 140 PANTHER PROTEIN TIFY 9 15 138 - -
Bva06g01688 140 Pfam Jas motif 117 137 IPR018467 -
Bva06g01688 140 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 15 138 IPR040390 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01688 54 134 Tify Gene Family AT5G13220 48.810 7.13e-17 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Bva06g01688 tify 5.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01688 K13464 - qsu:112025728 114.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01688 06 11849910 11851136 Bva06g01688 06 11849910 11851136 ECH