Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01687 ATGACCATGGTTCCGGCTCACAAGCTTTCAAAACAGGAACAGCAAAACCAAcgtaagaaacaaaatcatcatCTAGTTTACGGCAGCGGTTATGGTGATGGTTGCGGTGGCGGTTATGCGACAGAAACCACAGATGGAATTGTTATGAGCGGTCGGATTGAAGGGTATAATTGGAGCGAATATTACTTGGGATCTGATTTAGCAGTTAGCCGCCATAGCCACATGGCTGAAGATGAATCAACAAGTAACAGTTTTAACGAAGCAGCTGGGTCCAGCGAAGGTCGGCAAGATAATAAGGAGCAACCATGGCTAAGCCTGCAATTAAGTATAGGCTGTCAAACGGCGTCACCGTCCACCTCCATCTCCACCGACCACCACGATCGTGATCCGACATTAATAATACCTCCAACACCATCGGCTTTGAGCTCTGGGCTTGTGGAGCTGGACTTATTGCCTTCCGGGGCTGCCCATTCCCATTCGCTTTCGCGGCCCTTTCAGTTCCAGTTTCAGTTGCCTGAAACTTCACCGCGGGCCTTTTTGGGATATCCAGCATCAGTATCGACATTATCAGCTAGCACCGGCGCTTCGATTCTTCAACAACAAACGACAGGGGGTCCAAGCTTTGCTCAGCATCAAGAGATAAACTGGGCATTTGGTCCACTTGGAatgccttcttcttcttcttggagGCCTCCTGTACCCCTAGGATCTTATTTTCCGAGTCCGCTCCAATTCCCCGCAGCTGCTTTTGACGTTGCTGGGCCAAGTTCTGATATTAAAGTTGTTGATCCTCCTCGCAGACATCACACTGGAATCTGGTTTATGTTACAAGCTTCCCACAATCAAGCAAAGGAACCATTCTTGCCTCAAATACCTAAGAGCTACCTCAGAATCAAGGATGGAAGGATGACAGTTCgattattaatgaaatatctGGTTAACAAGCTCAGACTGGAAAGCGAATCCGAGATAGAGATAAGATGTAGAGGGCAGCAACTTGTACCATTGTTGACGTTGGAGCATGTAAGAGATAACATATGGACGAGAGGCTCAAGCAGCAGTAGTCCCGGCAGCAGGGATGCAGCCACGACCACGACTTTGCTTTCAGAATCGTCAACCACAAATCATATAATGGTGCTCCACTACGGTAGAAGCGCTAGCAGCTA 1166 0.4614 MTMVPAHKLSKQEQQNQRKKQNHHLVYGSGYGDGCGGGYATETTDGIVMSGRIEGYNWSEYYLGSDLAVSRHSHMAEDESTSNSFNEAAGSSEGRQDNKEQPWLSLQLSIGCQTASPSTSISTDHHDRDPTLIIPPTPSALSSGLVELDLLPSGAAHSHSLSRPFQFQFQLPETSPRAFLGYPASVSTLSASTGASILQQQTTGGPSFAQHQEINWAFGPLGMPSSSSWRPPVPLGSYFPSPLQFPAAAFDVAGPSSDIKVVDPPRRHHTGIWFMLQASHNQAKEPFLPQIPKSYLRIKDGRMTVRLLMKYLVNKLRLESESEIEIRCRGQQLVPLLTLEHVRDNIWTRGSSSSSPGSRDAATTTTLLSESSTTNHIMVLHYGRSASS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01687 388 MobiDBLite consensus disorder prediction 115 138 - -
Bva06g01687 388 PANTHER RING FINGER PROTEIN 1 385 - -
Bva06g01687 388 PANTHER RING FINGER PROTEIN 1 385 IPR044171 GO:0007275
Bva06g01687 388 MobiDBLite consensus disorder prediction 79 100 - -
Bva06g01687 388 MobiDBLite consensus disorder prediction 1 22 - -
Bva06g01687 388 MobiDBLite consensus disorder prediction 349 368 - -
Bva06g01687 388 Gene3D - 266 353 - -
Bva06g01687 388 MobiDBLite consensus disorder prediction 73 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01687 Bva-Chr6 11833930 11841140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01687 285 344 C3H Transcription Factor Family AT3G23060 45.000 6.70e-07 49.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01687 06 11833930 11841140 Bva06g01687 06 11833930 11841140 ECH