Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01683 ATGTCTTCCCTCCATTGGAATTCTATCGCAATGTGTGTAGCAATTCTTCGGTTATGTCACCTTGTACTTGGACTTCCATATTCTCCGACTTCTCGCTCGGATATAATTACACGATTACCGGGTCAACCTCAAGTCGTGTTTCGTCAGTACTCGGGTTATGTGACCGTTGACGACAAAAACCAAAGAGCTCTGTTCTACTACTTTGTTGAAGCAGAAACAGATCCAGTTTCCAAGCCCCTTGTTCTCTGGCTTAATGGAGGGCCTGGTTGTTCTTCTCTGGGAGTTGGGGCATTTTCCGAGAATGGACCGTTCAGGCCGAAAGGGGAGGCCGTGGTTAGGAATGAGTTTAGCTGGAACAGAGAGGCAAATATGTTGTATTTAGAAGCACCAGTAGGAGTTGGCTTCTCCTACTCAGCGGATGCTTCCTTTTACAGTGGTGTCAATGACGAGATTACAGGCAAGGATAATCTGGTATTCTTGCAAAACTGGTTTCTCAAGTTCCCAGAATACAGAAACAGAAGTTTATTCCTTCTAGGAGAAAGCTATGCTGgCCACTATGTTCCTCAACTGGCTGAACTCATGCTTCAATTCAACAAAAAGgacaaattattcaatttgaaaggCATTGCTCTTGGAAACCCAGTCTTGGAATTTGCCACGGATTTCAACTCGAGAGCCGAATTCTTCTGGTCTCATGGATTAATTTCAGATTCAACGTACAGAATGTTCACATCTGTGTGTAACTATTCGCGATATGTGAGCGAATATTACAGGGGCACTGTTTCTCCCATCTGTTCAAGGGTGATGAGCCAAGTCAGTACAGAAACTAGTAGATTTGTTGACAAGTATGATGTGACCCTTGATGTTTGTATATCTTCTGTGTTTTCACAAACTAAAAATCTAAATCCCCAGCAAGTTACTGAAACCATAGATGTGTGCGTGGAAGATGAAACATTGAATTATCTAAATAGGAAAGATGTACAATTGGCTTTACATGCACGCCTTGTTGGAGTAAGACGATGGTCGGCTTGCAGCAATGTCTTGGATTATGAGCTGCTCGACTTGGAAACGCCAACAATCACAGTTGTGGGCAAACTCGTTAGAGCAGAAATCCCAGTATTGGTTTATAGTGGCGATCAGGATTCAGTCATCCCGTTAACTGGAACTCGAACATTAATCCATCAACTGGCAAAAGAACTTGGACTGAAAACCACTGTGCCTTACGGGGTCTGGTTTGAGAGACAGCAGGTTGGTGGATGGACTCAAGTTTATGGTAACATCCTTTCGTTTGCTACCATCAGAGGAGCATCACATGAAGCTCCATTTTCGCAGCCTCAGAGGTCTCTTGTGCTGTTCAAGTCATTCTTGGAAGGACGACCTCTACCAAAAGCATTTTG 1397 0.4309 MSSLHWNSIAMCVAILRLCHLVLGLPYSPTSRSDIITRLPGQPQVVFRQYSGYVTVDDKNQRALFYYFVEAETDPVSKPLVLWLNGGPGCSSLGVGAFSENGPFRPKGEAVVRNEFSWNREANMLYLEAPVGVGFSYSADASFYSGVNDEITGKDNLVFLQNWFLKFPEYRNRSLFLLGESYAGHYVPQLAELMLQFNKKDKLFNLKGIALGNPVLEFATDFNSRAEFFWSHGLISDSTYRMFTSVCNYSRYVSEYYRGTVSPICSRVMSQVSTETSRFVDKYDVTLDVCISSVFSQTKNLNPQQVTETIDVCVEDETLNYLNRKDVQLALHARLVGVRRWSACSNVLDYELLDLETPTITVVGKLVRAEIPVLVYSGDQDSVIPLTGTRTLIHQLAKELGLKTTVPYGVWFERQQVGGWTQVYGNILSFATIRGASHEAPFSQPQRSLVLFKSFLEGRPLPKAF 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01683 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Bva06g01683 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
Bva06g01683 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 428 441 IPR001563 GO:0004185|GO:0006508
Bva06g01683 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Bva06g01683 465 Gene3D - 360 458 - -
Bva06g01683 465 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 463 IPR001563 GO:0004185|GO:0006508
Bva06g01683 465 Pfam Serine carboxypeptidase 40 458 IPR001563 GO:0004185|GO:0006508
Bva06g01683 465 ProSitePatterns Serine carboxypeptidases, histidine active site. 428 445 IPR033124 GO:0004185
Bva06g01683 465 Gene3D - 313 349 - -
Bva06g01683 465 Gene3D alpha/beta hydrolase 31 292 IPR029058 -
Bva06g01683 465 PANTHER CARBOXYPEPTIDASE 6 463 - -
Bva06g01683 465 ProSitePatterns Serine carboxypeptidases, serine active site. 177 184 IPR018202 GO:0004185
Bva06g01683 465 SUPERFAMILY alpha/beta-Hydrolases 36 462 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01683 Bva-Chr6 11813878 11817108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01683 321 461 Calmodulin-binding Proteins AT2G22960 26.389 2.43e-12 63.9