Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01682 ATGTTCCAGAAAAGATATATCCCTCCTTATCTTACAAAGGAAATCTGCAATTCTCTCttgctatttttattaagcttGCACTATACACGTGTGCAATGCCAAGGAAGGTTGAGTCAGCACATGTCTTCAGAGATTCCATCGCCGGCTGGGCGATCAGAATACAAGAATAACCTCCGGAATATCATTCTCAGCATTGTTTTAGGAGCAGTAACCGGATTAGTTGGCTCTGTTGTTTTCGCACTTGTAGTTCGTTGCTTTGTTCAGTATTTGAAGAAGACCCCAATTCTAAAGGGCCCTGTCATATTTTCCCCCAAAATTGCTCCCAAGACACTCCAATCAGCTTTGGCTAAAGAAAACCACTTGCTTGGTTCAAGCCTAAATGGGAAATACTATAAGACAGTGCTAGACAATGGTCTCACAATTGCTGTCAAGAGGCTAACACCCTTTGAAAGCGGTTCTCCAGAGACTCGGAGAAAATCGGTGAAGAGGCAGATACAGAAGGAGCTGGAATTGCTTGCCAGCTTAAGACATCGGAATTTGATGAGCTTGCGGGCCTACGTTCGTGAACCTGATAGATTTTCCTTGGTTTATGATTATGTACCCACTGGGAGCCTTGCAGATATAATGAATAGGGTTAAGGAAAGTGAATTGCCGCTTAGCTGGGAAGTTCGGCTTCGGATTGCTGTTGGGGTGGTTAAAGGACTTCAGTATCTTCATTTCACATGTGTACCACAGATTCTGCACTATAACTTGAAGCCCACAAACGTCATGTTGGATGCAGATTATGAACCAAGGTTGGCTGATTATGGATTGTCTACACTTCTACCCAACTTAGATAGAGACACATCTGCTTATAGTCCCCCTGAATGTGTCCACAATTGCAGCAGGTACACTGGTAAAAGTGATATCTTCAGTTTTGGTATGATATTGGGTGTTCTGTTAACCGGCAAGGATCCTGTGGATTCATTCTTTGGAGAAGCAGCCGGTGGGGGAAGTTTGGGATGTTGGTTACGACACTTGCAGCAAGCAGGTGAAGCTAAGGAAGCACTTGATAAGAGTGTTCTGGGAGAAGAAGGGGAGGAAGATGAGATGCTGATGGCTGTCAGAATTGCTGCAGCGTGCCTCTCTGATATGCCTGCAGACAGGCCTTCCAGTGATGAGCTCGTTCACATGCTAACGCAACTTCATAGTTTTTG 1196 0.4415 MFQKRYIPPYLTKEICNSLLLFLLSLHYTRVQCQGRLSQHMSSEIPSPAGRSEYKNNLRNIILSIVLGAVTGLVGSVVFALVVRCFVQYLKKTPILKGPVIFSPKIAPKTLQSALAKENHLLGSSLNGKYYKTVLDNGLTIAVKRLTPFESGSPETRRKSVKRQIQKELELLASLRHRNLMSLRAYVREPDRFSLVYDYVPTGSLADIMNRVKESELPLSWEVRLRIAVGVVKGLQYLHFTCVPQILHYNLKPTNVMLDADYEPRLADYGLSTLLPNLDRDTSAYSPPECVHNCSRYTGKSDIFSFGMILGVLLTGKDPVDSFFGEAAGGGSLGCWLRHLQQAGEAKEALDKSVLGEEGEEDEMLMAVRIAAACLSDMPADRPSSDELVHMLTQLHSF 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01682 398 Gene3D Transferase(Phosphotransferase) domain 1 200 397 - -
Bva06g01682 398 Coils Coil 158 178 - -
Bva06g01682 398 PANTHER - 14 398 - -
Bva06g01682 398 SUPERFAMILY Protein kinase-like (PK-like) 120 392 IPR011009 -
Bva06g01682 398 ProSiteProfiles Protein kinase domain profile. 116 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01682 398 Pfam Protein kinase domain 119 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01682 398 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE CORYNE 14 398 - -
Bva06g01682 398 Gene3D Phosphorylase Kinase; domain 1 105 199 - -
Bva06g01682 398 CDD STKc_IRAK 122 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01682 Bva-Chr6 11810208 11812877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01682 62 395 Receptor kinase-like Gene Family AT2G31880 34.648 4.69e-60 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Bva06g01682 Pkinase 2.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01682 - - gmx:102664172 633.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01682 06 11810208 11812877 Bva06g01682 06 11810208 11812877 ECH