Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01681 ATGCAATTCGCAAAGCTCGATGACTCTCCTATGTTCCGCAAGCAGATACAGTGCCTGGAGGAAAGTGCGGAATCtttgagagagagaagtttaaaattttataaagggTGCAGAAAATACACtgAAGGACTTGGGGAGGCATATGATGGGGACATTGCATTTGCAAGTGCGCTAGAAGCTTTTGGCGGAGGCCATAATGACCCCATCAGTGTGGCTTTTGGAGGCCCTGTTATGACTAAATTCACCATTGCCTTAAGAGAAATTGGGACATACAAGGAAGTCCTTCGCTCACAGgTTGAGCATATGCTAAATGATAGATTGCTCCAGTTTGCCAATATTGATTTGCATGAGGTCAAGGAAGCACGGAAATGTTTTGACAAGGCCAGCCTTATTTATGACCAGGCCCGTGAAAAATTTCTGTCACTGAGAAAAGGCACAAGAACTGACGTAGCTGCTGCCCTAGAAGAGGAGCTACATAATGCAAGGTCTACATTTGAGCAAGCTCGTTTTAATCTGGTTACCGCATTGTCAAATGTTGAAGCAAAGaagagatttgaatttttggaggCAGTCAGTGGGACCATGGATGCGCATCTTCGTTACTTCAAACAGGGGTATGAACTGTTGCACCAAATGGAGCCATATATTAACCAGGTCTTGACTTATGCCCAGCAATCAAGAGAAAGATCTAACTATGAGCAAGCAGCTCTAAATGAAAGAATGCAAGAGTACAAACGGCAGGTTGATCGAGAGAGTAGGTGGTCTTCTAAAGGTTCTAATGGCTCTCCTAATGGAGATGGTATACAAGCCATTGGTAGAAGTTCACATAAAATGATAGAGGCAGTTATGCAATCAGCAGCAAAAGGAAAGGTTCAAACTATCCGACAAGGTTATCTCTCAAAGCGTTCCTCAAACTTAAGGGGTGACTGGAAAAGGAGGTTTTTTGTTCTTGATAGCCGAGGAATGCTGTATTATTATCGTAAACAGTGCAGCAAATCATCTgggTCTAGTAGCCAACATTCTGGTCAGAGGAATAGTTCTGAGCTTGGTTCTGGACTCTTGAGTCGATGGCTGTCTTCTCATCATCATGGTGGGGTACATGACGAGAAATCCGTTGCTCATCACACAGTGAACCTGCTTACATCAACTATCAAAGTTGACGCTGATCAATCAGATTTGAGGTTTTGCTTCAGGATCATTTCACCAACAAAGAATTATACTTTACAGGCAGAAAGTGCGCTGGACCAAATGGATTGGATTGAAAAGATCACAGGTGTGATTGCCTCATTGTTGAGTTCTCAGATTCCTGAAAGGTGCTTGCCTGCAAGTCCAATGGGAAGTGGTCATCATAGGTCTGCCAGTGAAAGTAGCTCATTTGAAAGTTCAGATTTTGATCACTCTGCTGTTGAAGAATTTACATCTGAGAGAAGTCTTGCTTCTGCACATCTGGAACGGCCCTCAAGAAGTTTGCAGCAGCAGCGGTCCTGTATGAAAAGTGAGAAGCCAATTGATGTGTTGCAAAGAGTGTGTGGAAATGATAAATGTGCTGATTGCGGAGCCCCTGAACCTGATTGGGCATCATTAAATCTTGGTGTTCTTGTTTGTATTGAGTGTTCTGGTGTTCACCGTAACCTCGGTGTACACATATCAAAGGTTAGGTCTCTTACATTGGATGTTAAAGTGTGGGAAACTTCCGTAATAAGTTTGTTTCAGTCTCTTGGGAATACTTTTGCCAACTCAGTCTGGGAGGAACAATTGCAATCAAGAAGTGCCTTTCAGGTTGATCTTGTCCCCACAGGCTTAAACAAGTCCGATAAACCACTGCTGTTTTTCATCAGCAAACCTTCTCAATCCGATTCCTTATCTGTGAAGGAAAAGTTTATCCATGCAAagTATGCAGAGAAGCTTTTTGTTCGCAAGCCAAAGGACAGTCAATATCGTCTCTTGGTGGCACAACAGATCTGGGAGGCTGTTCGTGCTAATGACAAAAAAGCTGTATACCGTTACATTGTTAATTCTGAAGTTGATGTTAATGCTGTTTATGAGCAAACATGCAACTCTTTAACTCTTGCCAAAGTGATGCTATTACAAGAGCAGACAAGCCATGATCACAACTCCACTTCTATAGTAGGGAACGCATTGGATTGGTCCTCCTCTGGCTCTTTGAACTTGGTGGGTACAAAAGGTCGGGCCATGGACGACCTAGACGGCTGCACCCTACTTCACATTGCTTGCGAAACTGCCGACATTGGTATGCTGGAGCTCCTCCTACAGTATGGTGCAAATATAAATGCAACTGATTTGAGAGGTCAAACGCCACTCCACCACTGTATTCTCAAAGGCAGAACAGCATTTGCTAGATTACTTCTTTCAAGGGGAGCTGATCCTCGAGCTGTGGATGAGGAGGGAAGAAAACCTATTGACCTTGCAGTACAGTCAAATTTTGACGACAGTGAGGTCCTTGCACTATTATCTGATTCAAACGGATG 2489 0.4255 MQFAKLDDSPMFRKQIQCLEESAESLRERSLKFYKGCRKYTEGLGEAYDGDIAFASALEAFGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQFANIDLHEVKEARKCFDKASLIYDQAREKFLSLRKGTRTDVAAALEEELHNARSTFEQARFNLVTALSNVEAKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLTYAQQSRERSNYEQAALNERMQEYKRQVDRESRWSSKGSNGSPNGDGIQAIGRSSHKMIEAVMQSAAKGKVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSSSQHSGQRNSSELGSGLLSRWLSSHHHGGVHDEKSVAHHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQIPERCLPASPMGSGHHRSASESSSFESSDFDHSAVEEFTSERSLASAHLERPSRSLQQQRSCMKSEKPIDVLQRVCGNDKCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWETSVISLFQSLGNTFANSVWEEQLQSRSAFQVDLVPTGLNKSDKPLLFFISKPSQSDSLSVKEKFIHAKYAEKLFVRKPKDSQYRLLVAQQIWEAVRANDKKAVYRYIVNSEVDVNAVYEQTCNSLTLAKVMLLQEQTSHDHNSTSIVGNALDWSSSGSLNLVGTKGRAMDDLDGCTLLHIACETADIGMLELLLQYGANINATDLRGQTPLHHCILKGRTAFARLLLSRGADPRAVDEEGRKPIDLAVQSNFDDSEVLALLSDSNG 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01681 829 Gene3D - 285 438 IPR011993 -
Bva06g01681 829 CDD ArfGap 503 632 - -
Bva06g01681 829 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD1 1 827 - -
Bva06g01681 829 PANTHER CENTAURIN/ARF 1 827 IPR045258 GO:0005096
Bva06g01681 829 Coils Coil 151 171 - -
Bva06g01681 829 SMART arf_gap_3 500 645 IPR001164 GO:0005096
Bva06g01681 829 Pfam Ankyrin repeats (many copies) 739 790 IPR002110 GO:0005515
Bva06g01681 829 CDD PH_ACAP 295 432 - -
Bva06g01681 829 ProSiteProfiles Ankyrin repeat region circular profile. 736 767 - -
Bva06g01681 829 ProSiteProfiles ARF GTPase-activating proteins domain profile. 500 645 IPR001164 GO:0005096
Bva06g01681 829 SUPERFAMILY PH domain-like 293 443 - -
Bva06g01681 829 SUPERFAMILY ArfGap/RecO-like zinc finger 500 640 IPR037278 -
Bva06g01681 829 SUPERFAMILY BAR/IMD domain-like 6 315 IPR027267 -
Bva06g01681 829 ProSiteProfiles Ankyrin repeat region circular profile. 769 801 - -
Bva06g01681 829 Pfam Putative GTPase activating protein for Arf 503 640 IPR001164 GO:0005096
Bva06g01681 829 ProSiteProfiles PH domain profile. 292 428 IPR001849 -
Bva06g01681 829 SMART 5bar 11 218 IPR004148 GO:0005515|GO:0005737
Bva06g01681 829 Gene3D Arf GTPase activating protein 479 644 IPR038508 -
Bva06g01681 829 SUPERFAMILY Ankyrin repeat 657 817 IPR036770 -
Bva06g01681 829 Pfam PH domain 294 427 IPR001849 -
Bva06g01681 829 Coils Coil 227 247 - -
Bva06g01681 829 SMART ANK_2a 736 765 IPR002110 GO:0005515
Bva06g01681 829 SMART ANK_2a 769 798 IPR002110 GO:0005515
Bva06g01681 829 PRINTS HIV Rev interacting protein signature 554 575 IPR001164 GO:0005096
Bva06g01681 829 PRINTS HIV Rev interacting protein signature 512 531 IPR001164 GO:0005096
Bva06g01681 829 PRINTS HIV Rev interacting protein signature 531 548 IPR001164 GO:0005096
Bva06g01681 829 MobiDBLite consensus disorder prediction 441 460 - -
Bva06g01681 829 ProSiteProfiles Ankyrin repeat profile. 769 801 IPR002110 GO:0005515
Bva06g01681 829 ProSiteProfiles Ankyrin repeat profile. 736 768 IPR002110 GO:0005515
Bva06g01681 829 Pfam BAR domain of APPL family 6 232 - -
Bva06g01681 829 CDD BAR_SFC_plant 14 215 IPR035670 -
Bva06g01681 829 Gene3D Arfaptin homology (AH) domain/BAR domain 4 251 IPR027267 -
Bva06g01681 829 MobiDBLite consensus disorder prediction 247 270 - -
Bva06g01681 829 MobiDBLite consensus disorder prediction 254 269 - -
Bva06g01681 829 SMART PH_update 293 430 IPR001849 -
Bva06g01681 829 Gene3D - 645 825 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01681 Bva-Chr6 11800767 11809702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01681 512 639 C2H2 Transcription Factor Family AT4G21160 41.860 1.15e-20 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01681 K12489 - gmx:100789134 1430.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01681 06 11800767 11809702 Bva06g01681 06 11800767 11809702 ECH